Pairwise Alignments

Query, 283 a.a., kinase from Pseudomonas simiae WCS417

Subject, 284 a.a., 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  278 bits (712), Expect = 7e-80
 Identities = 143/268 (53%), Positives = 182/268 (67%), Gaps = 1/268 (0%)

Query: 9   PSPAKLNLMLHILGRREDGYHELQTLFQFLDYGDELTFAVRDDGVIKLHTEFEGVPHDS- 67
           P+PAKLNL LHI GRR DGYHELQTLFQF+D  D+L F V D   + LH+    V  DS 
Sbjct: 10  PAPAKLNLFLHINGRRSDGYHELQTLFQFVDCCDQLDFRVTDTPELILHSTMSAVVADSD 69

Query: 68  NLIVKAAKKLQEQSGCRLGIDIWIDKILPMGGGIGGGSSNAATTLLGLNHLWQLGWDDDR 127
           NLI++AAK LQ+ +G   G +IW+DK LPMGGG+GGGSS+AATTL+ LN LW      D 
Sbjct: 70  NLILRAAKSLQQATGFNGGAEIWLDKRLPMGGGLGGGSSDAATTLVALNRLWNTQLSHDE 129

Query: 128 LAALGLTLGADVPVFVRGHAAFAEGVGEKLTPEYPEEPWYVVLVPQVSVSTAEIFSDPLL 187
           LAA+GL LGAD+PVF+ G AAFA+GVGE+L    P E WY+V+ P   VSTA +F DPLL
Sbjct: 130 LAAIGLKLGADIPVFIHGFAAFAQGVGERLQAVNPAELWYLVIAPDAHVSTAAVFQDPLL 189

Query: 188 TRNSPPIKVRPVPKGNSRNDCLPVVARRYPEVRNALNLLGKFTEAKLTGTGSCVFGGFPS 247
            RN+P + +  +      NDC  +V  +YP+V  AL  L ++  +++TGTG+CVFG F S
Sbjct: 190 PRNTPKLGLDTLLSQPWANDCQELVVSKYPQVAKALGWLLEYAPSRMTGTGACVFGEFSS 249

Query: 248 KAEADKVSALLTETLTGFVAKGSNVSML 275
           + +A    A L   + GFVAKG N+S L
Sbjct: 250 QQQALAALAKLPSDMQGFVAKGMNISPL 277