Pairwise Alignments

Query, 366 a.a., GTP-binding protein from Pseudomonas simiae WCS417

Subject, 365 a.a., GTP-dependent nucleic acid-binding protein EngD from Phaeobacter inhibens DSM 17395

 Score =  409 bits (1050), Expect = e-119
 Identities = 220/367 (59%), Positives = 262/367 (71%), Gaps = 5/367 (1%)

Query: 1   MGFNCGIVGLPNVGKSTLFNALTKSGIA-AENFPFCTIEPNSGIVPMPDPRLDALAAIVN 59
           MGF  GIVGLPNVGKSTLFNALTK+  A A NFPFCTIEPN G V +PD RLD LAAI  
Sbjct: 1   MGFKMGIVGLPNVGKSTLFNALTKTASAQAANFPFCTIEPNVGEVGVPDARLDKLAAIAG 60

Query: 60  PKRILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSV 119
            K+I+PT M FVDIAGLV GAS+GEGLGN+FLANIRETDAIAHV+RCFED +V HV   V
Sbjct: 61  SKQIIPTRMTFVDIAGLVKGASQGEGLGNQFLANIRETDAIAHVLRCFEDGDVTHVDGRV 120

Query: 120 DPKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKGLLEQLIAHFTLGKPAR 179
           DP  D E+I+ EL+ +DL+S EK+   + R  KG DK+A  Q  LL    A    GKPAR
Sbjct: 121 DPVADAEVIETELMLSDLESIEKRRANLVRKLKGNDKEAQQQDRLLADAQAMLEEGKPAR 180

Query: 180 SLMKTMGADEKAVIKGFHLLTTKPVMYIANVAE-DGFENNPLLDVVKAIADEEGAIVVPV 238
             +  + A++    K   LLTTKPV+Y+ NV E +  E N     V  +A  +G   V +
Sbjct: 181 --LVEVDAEDAKAWKMLQLLTTKPVLYVCNVGESESVEGNEYSAKVAEMAAGQGNSHVII 238

Query: 239 CNKIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYFTAGVEEVRAWTV 298
             +IE EI++L+  EE +MFL  +GL E GL+R+IRAGYE+L+L+TYFT G +E RAWT+
Sbjct: 239 SAQIEEEISQLEP-EEAEMFLSEMGLAEAGLDRLIRAGYELLHLETYFTVGPKEARAWTI 297

Query: 299 KVGATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKEYIVKDGD 358
           + G  APQAAGVIH DFEKGFIRAE IAY DFI   GE GAKEAGK R EGK Y+VKDGD
Sbjct: 298 RTGTAAPQAAGVIHGDFEKGFIRAETIAYEDFIAHNGEQGAKEAGKMRAEGKGYVVKDGD 357

Query: 359 VMHFRFN 365
           V+HF FN
Sbjct: 358 VLHFLFN 364