Pairwise Alignments

Query, 273 a.a., type III secretion protein from Pseudomonas simiae WCS417

Subject, 557 a.a., flagellar MS-ring protein from Sinorhizobium meliloti 1021

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 7/139 (5%)

Query: 56  DGVIVVVNATEIARAVRTLEAVGLPRAARTTLGNTFRKEGVIS-TPLEERARYIYALSQE 114
           DG  + V      +A   L   GLP +A       F   G +  T   +    + AL  E
Sbjct: 79  DGGSIQVPVGMTGKARLLLAERGLPSSANAGY-ELFDNVGSLGLTSFMQEVTRVRALEGE 137

Query: 115 LETTLSNIDGVIVARVHVVLPERVAPGEPVQPASASVFIKHDPRLDPDSIRARVRRMVAS 174
           +  T+  I G+  ARVH+V+PER +  +  Q  +ASV I+    +   S  + +R +VAS
Sbjct: 138 IARTIQQISGIAAARVHIVMPERGSFRKAEQTPTASVMIRASATVG-RSAASSIRHLVAS 196

Query: 175 SLPGM----ATAVDNSQKL 189
           S+PG+     T +D++ +L
Sbjct: 197 SVPGLDVDDVTVLDSTGQL 215