Pairwise Alignments

Query, 273 a.a., type III secretion protein from Pseudomonas simiae WCS417

Subject, 271 a.a., type III secretion lipoprotein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  111 bits (278), Expect = 1e-29
 Identities = 67/188 (35%), Positives = 106/188 (56%), Gaps = 8/188 (4%)

Query: 9   LVICLSLLLQACSERVELHRQLTEQEANEVVAELADKHIRATKVP-AKDGVIVVVNATEI 67
           L   L +LL  C  + EL++ L E++AN ++A L  + I   K    K+G  + V   ++
Sbjct: 19  LAALLLVLLTGC--KAELYKGLNEEQANTMLATLLKRGIEVDKQSEGKNGYTLSVERRQV 76

Query: 68  ARAVRTLEAVGLPRAARTTLGNTFRKEGVISTPLEERARYIYALSQELETTLSNIDGVIV 127
            +A+  L    LPR    +LG  F  +G+I++P EE+AR  YA+SQEL  T S IDGV+ 
Sbjct: 77  VQALEVLRENSLPREQYQSLGKVFSGDGMIASPSEEKARLSYAISQELADTFSRIDGVLT 136

Query: 128 ARVHVVLPERVAPGEPVQPASASVFIKHDPRLDPDSIRARVRRMVASSLPGMATAVDNSQ 187
           AR HVVL       +   PASA+VF++H       ++  ++R M A ++PG+     + +
Sbjct: 137 ARAHVVLASSDVGTDTRTPASAAVFLRHTEDSPVVNLIPKIREMTAKAVPGL-----DYE 191

Query: 188 KLTVVFVP 195
           K++V+ VP
Sbjct: 192 KVSVMLVP 199