Pairwise Alignments

Query, 713 a.a., secretin from Pseudomonas simiae WCS417

Subject, 759 a.a., General secretion pathway protein D from Xanthomonas campestris pv. campestris strain 8004

 Score = 76.6 bits (187), Expect = 4e-18
 Identities = 101/446 (22%), Positives = 181/446 (40%), Gaps = 64/446 (14%)

Query: 164 DGVVLVSGPKRYIEQIKQFSSQRRSPDEKQSVLSYPLKFANA---ADRQVDY-------- 212
           + V++++   RY++QI+Q+  +  S      + SY LK+  A   ADR  +         
Sbjct: 299 NAVLVITPQPRYLDQIQQWLDRIDSAGGGVRLFSYELKYIKAKDLADRLSEVFGGRGNGG 358

Query: 213 -RGEKLVVPGVANILRGLLEPR-------SPSALTGLTQRPASQPAPLTPNVPRLGNPLL 264
             G  LV  GV N+L              S S  TG      S  +  +      G    
Sbjct: 359 NSGPSLVPGGVVNMLGNNSGGADRDESLGSSSGATGGDIGGTSNGSSQSGTSGSFGGSSG 418

Query: 265 SQMLDANGTTGQMAPMPALTSRAPVSTSRIRVEADVRNNAVLIYDLPERQTMYRELITQL 324
           S ML    +T Q   +        V   ++ V A    N +L+    +     R++I +L
Sbjct: 419 SGMLQLPPSTNQNGSVTL-----EVEGDKVGVSAVAETNTLLVRTSAQAWKSIRDVIEKL 473

Query: 325 DVARKLIEIDAIILDIERTQLREFGVNWGFQNSRFR-------GGVNMAPGTSSQL---- 373
           DV    + I+A I ++  T   ++GVNW F+N+          GG N+       +    
Sbjct: 474 DVMPMQVHIEAQIAEVTLTGRLQYGVNWYFENAVTTPSNADGSGGPNLPSAAGRGIWGDV 533

Query: 374 --SIDNRDRFY--------ADIRALEAKGLATMVSNPSVLTLENQPAVID------FNRT 417
             S+ +    +        A I AL+      ++  PSV    N  A ++       N T
Sbjct: 534 SGSVTSNGVAWTFLGKNAAAIISALDQVTNLRLLQTPSVFVRNNAEATLNVGSRIPINST 593

Query: 418 QYITP-GRD--YATILPVTVGTSLQVVPRVTTGRGVHQIHLAVDIEDGNFDE-------- 466
              T  G D  ++++  +  G  L+V PRVT   G+  + +  ++               
Sbjct: 594 SINTGLGSDSSFSSVQYIDTGVILKVRPRVTKD-GMVFLDIVQEVSTPGARPAACTAAAT 652

Query: 467 TNPDRDPNHPDVRRGKVSTQAVMQEKRSLVVGGFHVTDSSDQQKKIPLLGDIPLLGKALF 526
           T  +    + D+   +V T+A +Q   ++++ G     ++D    IP L  +P++G ALF
Sbjct: 653 TTVNSAACNVDINTRRVKTEAAVQNGDTIMLAGLIDDSTTDGSNGIPFLSKLPVVG-ALF 711

Query: 527 SSTERHNNRRERLFILTPRVIGDQDD 552
               ++++RRE + ++TP ++ +  D
Sbjct: 712 GRKTQNSDRREVIVLITPSIVRNPQD 737