Pairwise Alignments

Query, 112 a.a., type III secretion system negative regulatory protein RspV from Pseudomonas simiae WCS417

Subject, 125 a.a., negative regulator of hrp expression HrpV from Pseudomonas fluorescens FW300-N2E2

 Score = 92.0 bits (227), Expect = 2e-24
 Identities = 49/109 (44%), Positives = 66/109 (60%), Gaps = 3/109 (2%)

Query: 6   RQVFFDNLVSGAAAHLPLAPGIKVCAQHAGQRPGVALCIAREALQAGQLQQVLERRFEQA 65
           RQ F  N+++G A +  +APGI+ C +      G+AL I  +AL+A Q+Q  LERRF Q 
Sbjct: 11  RQAFQKNIIAGIATYWEIAPGIEFCLRREPHSVGLALQIQSQALRANQIQHALERRFAQP 70

Query: 66  VVFEGCFIYLDPQHALVIWHAL---PATANALDRILSRMLSLATLQALD 111
             +   F++LDPQ ALV+W AL   P +   LD I SR LSL  L+ LD
Sbjct: 71  ADYAQLFVFLDPQRALVVWQALPDAPLSTELLDEIQSRQLSLLGLEDLD 119