Pairwise Alignments

Query, 452 a.a., ATP synthase from Pseudomonas simiae WCS417

Subject, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

 Score =  313 bits (802), Expect = 7e-90
 Identities = 176/420 (41%), Positives = 257/420 (61%), Gaps = 10/420 (2%)

Query: 30  GRIQRVNGMLLQCRLPQARIGDLCRVEKKPGDYMLAEIIGFDQQDAVLSALGNLEGVQVG 89
           G++ RV G+ L+    +A +G LC+VE   G+ M AE++GF   +  L     + GV  G
Sbjct: 24  GKLVRVVGLTLEATGCKAPVGSLCKVETMNGE-MEAEVVGFSGDNLFLMPSEQIIGVLPG 82

Query: 90  AGVERLGVAHRVQVSEALLGQVLDGFGRPITGEGPGAFVEADLPDTSAVLCEAPL-PTER 148
           A V  +     + V   LLG+V+DG G P+ G GP         D  A L   P+ P  R
Sbjct: 83  AKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGP------IYTDQRASLNAIPINPLAR 136

Query: 149 PRINRALATGVRSIDGLLTLGEGQRVGLFAGAGCGKTTLLAEIARNVDCDVIVFGLIGER 208
             IN  L  G+++I+GLLT+G+GQR+GLFAG+G GK+  L  + R     V+V GLIGER
Sbjct: 137 KPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGER 196

Query: 209 GRELREFLDHELDEQLRSKAVLVCATSDRSSMERARAAFTATALAEGYRRKGLRVLLLID 268
           GRE++EF++  L    R ++V+V A +D S + R +   TA  +AE +R +GL VLLL+D
Sbjct: 197 GREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMD 256

Query: 269 SLTRFARAQREIGLAAGEPLGRGGLPPSVYSLLPRLVERAGL--TRAGVITAIYTVLIEQ 326
           SLTRFA+AQREI L+ GEP    G PPSV++ LP LVERAG      G ITA +TVL E 
Sbjct: 257 SLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEG 316

Query: 327 DSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAVDVLASLSRILSNVAEPADIQAGTALR 386
           D + DP+AD  R++LDGHIVLSR++A+ GHYPA+DV  S+SR++  +     +    A+R
Sbjct: 317 DDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQITTDEHLLMSKAVR 376

Query: 387 RLLSAYQQIELMLKLGEYQPGSDALTDLAVDSRQAVDNFLRQDLREPAPMAATLEQLKEL 446
           ++LS  ++ + ++ +G Y+PG+D   D A   +  +D +L+Q ++E  P    +  L+ +
Sbjct: 377 QILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQQAMKETVPYDMCVNMLRHV 436