Pairwise Alignments

Query, 697 a.a., type III secretion protein HrpI from Pseudomonas simiae WCS417

Subject, 731 a.a., type III secretion system export apparatus subunit SctV from Ralstonia sp. UNC404CL21Col

 Score =  393 bits (1009), Expect = e-113
 Identities = 240/690 (34%), Positives = 399/690 (57%), Gaps = 33/690 (4%)

Query: 17  RAEVLGAVVVMAIVFIFIVPLPTWLVDILIALNICISCLLIVLALYLPGPLAFSSFPSIL 76
           R ++L A+ + ++V +F++PLPT ++D LI+LN+  S +L+ +++YLP  LAFSSFPS+L
Sbjct: 29  RYDLLIALFIGSVVALFVLPLPTVVLDGLISLNLAASVILLTISIYLPSALAFSSFPSLL 88

Query: 77  LLTTMFRLALSIATTRLILLEQDAGHIVEAFGNFVVGGNLAVGMVIFLILTLVNFLVITK 136
           L TT+FRL+L+IA+ +LILL+ +AGH+++ FG  VVGGN+ VG V+F ++ +V F+VI K
Sbjct: 89  LFTTLFRLSLNIASCKLILLQANAGHVIDTFGKLVVGGNVVVGGVVFTVIAIVQFVVIAK 148

Query: 137 GSERVAEVAARFSLDAMPGKQMSIDSDLRAGLIDGMQARDKREQLSRESQLFGAMDGAMK 196
           GSERVAEV ARF+LDAMPGKQMSID+DLRAG+I   QA+ +RE L +ESQL GAMDGAMK
Sbjct: 149 GSERVAEVGARFTLDAMPGKQMSIDADLRAGIITSDQAKHRRELLEQESQLHGAMDGAMK 208

Query: 197 FVKGDAIAGLIIVVVNLLGGFSTGMFQHGLSASESISLYSVLTIGDGLIAQIPALLISLT 256
           FVKGDAIAG++I V+N+L G + G   H +S ++++  Y+VLT+GDG+ +QIP+L++S+ 
Sbjct: 209 FVKGDAIAGILIAVINILAGIAVGALMHDMSVADALHRYAVLTVGDGMASQIPSLMVSIA 268

Query: 257 AGMIITRVAPDGRRGASNMGAEIARQMTSEPKSWMIASVGMLAFAVVPGMPTGVFILIAL 316
           AG++ TRV+        ++G  I  Q+ + P+  ++ ++ + AF +VPGMP   F+ +AL
Sbjct: 269 AGVVTTRVS-SREMNDRHLGQLIGAQIAAHPRGLLMGALVLFAFVLVPGMPKWAFLSLAL 327

Query: 317 VTGSLGYYLMRQRQRQEQPAAETAEAVRPEENGSEDLRGFDPS------RPYLLQFSPVI 370
           + G+   + +R+RQ    P      +V  E  G++  R  + S       P  ++ +  +
Sbjct: 328 LAGASAIHFLRERQ---APPILNLLSVGAEGMGAQPGRPEEVSAAAGIAAPVAVRLAENL 384

Query: 371 RGTPEVADLVHSIRQARNALVANIGLTLPPFEVELDDSLADDEMRFCVHEVPMVKASV-V 429
           R   ++  L +++ +++ A+  +IGL  P   +        +  R  V +V   + ++ V
Sbjct: 385 RKDIKLVPLQNALARSKAAVEDDIGLVFPRVHLTYSAQTLPNHYRIYVQDVFASEGTLQV 444

Query: 430 SH----VAVERKALSVEPAHAIAGLVERDEQDWLWLAPDDPLLDDPQLERFTAA----SL 481
           +H     A     +  E   A           W W+       D+     +  A     +
Sbjct: 445 AHRLWTEAAPPAGVDAESTVAFGPFTHA----W-WMTMPASQADETAKAAWGQALEPEQV 499

Query: 482 IVERMKQAMMLSGPQFLGIQESKSILSWLEHNQPELVQELQRIMPLSRFSAVLQRLASEG 541
           +   ++  +     Q +GIQE +++L  +  ++ ELV EL R++PL R + VL+RL  EG
Sbjct: 500 VARHVEAVIRRHAAQMVGIQEVQNMLQLVRRDRAELVGELTRLVPLQRVTDVLRRLLDEG 559

Query: 542 VPLRAVRLIVESLIEYGQHEREP-DALADYARIALKAQIYHQYSEAD-GLHAWLLSPQTE 599
           +P+R +  I+ESLI    HE +    L +  R+ L+ QI   +   D  L+  L     +
Sbjct: 560 IPIRNLNTILESLIARSPHEPDDVTMLVELVRMDLRRQITDHFCGPDRSLNVVLFEQSLQ 619

Query: 600 NILREALRQTQTGVFFALDDE-HSAVLVSLLNQAFPVR------PKLKSVMLVAQDLRSP 652
             + +A+ +T+ G    L  E  + +   + N    VR       + ++ ++VA   R+ 
Sbjct: 620 ERIEDAVVRTKQGNLLGLSREVRTNIADQVQNVTEAVRHGEATAGQPRTAIMVAMTCRAY 679

Query: 653 LRTLLLEEFNHVPVLSFAELGSASKVKVLG 682
           +R L+      +PV+S  E+ +  ++  +G
Sbjct: 680 VRRLIEATLPDLPVVSLQEIEADVQLHTVG 709