Pairwise Alignments

Query, 183 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

 Score = 65.1 bits (157), Expect = 7e-16
 Identities = 52/149 (34%), Positives = 69/149 (46%), Gaps = 7/149 (4%)

Query: 30  LRRFIHKRVLNPEDADDLLQLTYLEAWRNRERFSGNATLSTWMCGIAQNLIRNHFRRMYA 89
           LRRF      + + ADDL+Q     A  + ERF        W+  I +NL  +  RR   
Sbjct: 19  LRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRILRNLWIDQVRRQKT 78

Query: 90  KPVHCEFDESLWHGQEDNRNLDWEFEVNRRLE-KTLS-AIDHLPVEMRKTLYASLETDGS 147
             V  +  E     + D      E E   RL  KT++ AI  LP E R+ +      + S
Sbjct: 79  AGVQDDITE-----RHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLLVCVEELS 133

Query: 148 YQDTADALDIPIGTVRSRLSRAREQLKRA 176
           Y++ AD + IPIGTV SRL RAR  L  A
Sbjct: 134 YREAADVMGIPIGTVMSRLMRARRSLAEA 162