Pairwise Alignments

Query, 183 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 191 a.a., RNA polymerase sigma factor RpoE from Klebsiella michiganensis M5al

 Score = 65.9 bits (159), Expect = 4e-16
 Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 20/158 (12%)

Query: 32  RFIHK------RVLNPEDADDLLQLTYLEAWRNRERFSGNATLSTWMCGIAQNLIRNHFR 85
           R+ HK      R + P D  D++Q ++++AWR  + F G++   TW+  IA N  +N+  
Sbjct: 28  RYQHKVASLVSRYVPPGDIADVVQESFVKAWRALDSFRGDSAFYTWLYRIAVNTAKNYLV 87

Query: 86  RMYAKPVHCEFDESLWHGQEDN---------RNLDWEFEVNRRLEKTLSAIDHLPVEMRK 136
               +P   + D +     E            NL    E+ + + +T   I+ LP ++R 
Sbjct: 88  AQGRRPPSSDVDANDAENFESGGALKEISNPENLMLSEELRQIVFRT---IESLPEDLRM 144

Query: 137 TLYASLETDG-SYQDTADALDIPIGTVRSRLSRAREQL 173
            +    E DG SY++ A  +D P+GTVRSR+ RARE +
Sbjct: 145 AI-TLRELDGMSYEEIAAIMDCPVGTVRSRIFRAREAI 181