Pairwise Alignments

Query, 364 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

Subject, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  161 bits (408), Expect = 2e-44
 Identities = 117/353 (33%), Positives = 184/353 (52%), Gaps = 33/353 (9%)

Query: 1   MSKVRVGIIFGGRSAEHEVSLQSARNIVDALDRS-RFDPVLIGIDKAGHWHLNDTSNFLL 59
           M+K  + ++ GG S+EHE+SL SA  I   L+ +  F  + + + K G +          
Sbjct: 1   MTKTTILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWF---------- 50

Query: 60  NQENPALIALNQSNRELAVVPGKANQQLVETSGTGLLEHVDVIFPIVHGTLGEDGCLQGL 119
             E  AL+ L+ ++  L     KA+              +D + P +HG  GE G +Q +
Sbjct: 51  -SEQGALVYLDTNSATLN--SDKASYP------------IDFVVPCIHGFPGETGDIQSM 95

Query: 120 LRMADLPFVGSDVLGSAVCMDKDISKRLLRDAGIAVTPFITLTRSNAARTSFEAAVNKLG 179
           L +A +P++G     SA   +K  SK       I  TP++ LT++  +  S + A    G
Sbjct: 96  LELAGIPYLGCGPEASANSFNKITSKLWYDALDIPNTPYLFLTQNTPS--SIDKAKQAFG 153

Query: 180 L--PMFVKPANQGSSVGVSKVGDEAEYHAAVELALGFDEKVLVESAVKGREIECAVLG-N 236
               +FVK A QGSSVG  KV  E +   A+E A GF E+VLVE AVK RE+E +    N
Sbjct: 154 HWGSIFVKAARQGSSVGCYKVTTEDQIAPAIEAAFGFSEQVLVEQAVKPRELEVSAYEMN 213

Query: 237 ENPIASGCGEIVVSSG-FYSYDSKYIDDQAAQVVVPAD-ISQEASERIRGLAIEAFEVLG 294
                S  GE++   G FYSY+ KY  +  A+ V+ A+ ++++  E I+  A   F  + 
Sbjct: 214 GKLYISKPGEVIAPEGTFYSYEEKYSANSHARTVLEAENLTEKHKELIQTYAERVFIHMK 273

Query: 295 CSGLARVDVFLTDDGEVLINEINSLPGFTRISMYPKLWQAAGMSYSELVSRLI 347
              L+R+D FLT +G++ +NE+N+ PG T ISM+PK+ +  G  +SE + + +
Sbjct: 274 LRHLSRIDFFLTQEGQIYLNEVNTFPGMTPISMFPKMLEHNGHRFSEFLVQCV 326