Pairwise Alignments

Query, 364 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

Subject, 319 a.a., D-alanine--D-alanine ligase from Pseudomonas syringae pv. syringae B728a

 Score =  156 bits (394), Expect = 8e-43
 Identities = 110/343 (32%), Positives = 167/343 (48%), Gaps = 51/343 (14%)

Query: 5   RVGIIFGGRSAEHEVSLQSARNIVDALDRSRFDPVLIGIDKAGHWHLNDTSNFLLNQENP 64
           RV ++FGG+SAE  VSL S   ++ AL  +  D    GID           +FL      
Sbjct: 20  RVAVLFGGKSAERAVSLNSGNAVLGALLEAGVDA--FGIDVG--------DDFL------ 63

Query: 65  ALIALNQSNRELAVVPGKANQQLVETSGTGLLEHVDVIFPIVHGTLGEDGCLQGLLRMAD 124
                               Q+LV        E +D  F ++HG  GEDG +QGLL   +
Sbjct: 64  --------------------QRLVS-------EKIDRAFIVLHGRGGEDGTMQGLLECLE 96

Query: 125 LPFVGSDVLGSAVCMDKDISKRLLRDAGIAVTPFITLTRSNAARTSFEAAVNKLGLPMFV 184
           +P+ GS VL SA+ MDK  +K++ +  G+A      L       +    A  +LGLP+ V
Sbjct: 97  IPYTGSGVLASALAMDKLRTKQVWQSLGLATPAHAVLEN----ESDCICAATELGLPLIV 152

Query: 185 KPANQGSSVGVSKVGDEAEYHAAVELALGFDEKVLVESAVKGREIECAVLGNENPIASGC 244
           KPA++GSS+G++KV    E  AA + A  +D +VLVE  ++G E   A L  +     G 
Sbjct: 153 KPAHEGSSIGMAKVNSVDELIAAWKAASTYDSQVLVEQWIQGPEFTVASLRGQVLPPIGL 212

Query: 245 GEIVVSSGFYSYDSKYIDDQAAQVVVPADISQEASERIRGLAIEAFEVLGCSGLARVDVF 304
           G       FY YD+KY+     Q  +P  +     + ++ LA  A + +G +G AR DV 
Sbjct: 213 G---TPHSFYDYDAKYLASD-TQYRIPCGLGDAQEQELKQLAARACDAIGIAGWARTDVM 268

Query: 305 LTDDGEVLINEINSLPGFTRISMYPKLWQAAGMSYSELVSRLI 347
               G+  + E+N++PG T  S+ P   +AAG+ + +LV  ++
Sbjct: 269 QDAQGKFWLLEVNTVPGMTDHSLVPMAARAAGLDFQQLVLAIL 311