Pairwise Alignments

Query, 299 a.a., protoheme IX farnesyltransferase from Pseudomonas simiae WCS417

Subject, 300 a.a., protoheme IX farnesyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  345 bits (885), Expect = e-100
 Identities = 172/282 (60%), Positives = 204/282 (72%)

Query: 14  WRDYLELTKPKVVVLMLITSLVGMFLATRAGVPWTVLVFGNLGIALCAGGAAAVNHVVDR 73
           WRDY E+TKPKVV LML+T LVGM LA    +P   L+ G LGIA+ AG AAA+NH++DR
Sbjct: 17  WRDYFEMTKPKVVALMLLTVLVGMCLAMPTILPVQPLIAGLLGIAMMAGSAAALNHLIDR 76

Query: 74  RIDAVMARTHKRPLAEGRVSPLAALAFALFLAVAGLALLLAFTNPLAAWLTLASLLGYAV 133
           RID +MART+ RPL +GR+S   AL FA  L   G  +L  FTNPL AWLT ASL+GYA+
Sbjct: 77  RIDGLMARTYNRPLPKGRISATRALIFAAALGSLGFVILYVFTNPLTAWLTFASLIGYAL 136

Query: 134 IYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVTGHVSAEPLLLMLIIFAWTPPHFWALAI 193
           IYT +LKRATPQNIVIGGLAGA PPLLGW AVT       LLL++IIF WTPPHFWALAI
Sbjct: 137 IYTAYLKRATPQNIVIGGLAGAMPPLLGWTAVTNQFHGHALLLVIIIFLWTPPHFWALAI 196

Query: 194 HRKEEYAKADIPMLPVTHGEHYTKVHILLYTCALLAVSLMPYVIHMSGPLYLACALLLGG 253
           HR+ EYAK DIPMLPVTHG  +TK  ILLYT  L    L+P ++ MSGPLY  C+  L  
Sbjct: 197 HRRAEYAKVDIPMLPVTHGVEFTKTCILLYTILLAIACLLPVLVGMSGPLYFVCSSALSC 256

Query: 254 RFLQWAWVLYRGGRPHAAINTFKYSIWYLLLLFIALLLDHYL 295
            F+  AW L        A+  F++SI++L+LLF+ALLLDHYL
Sbjct: 257 GFIYKAWQLKYQDHEGLAMQVFRFSIYHLMLLFMALLLDHYL 298