Pairwise Alignments

Query, 273 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 291 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 5/156 (3%)

Query: 113 LSTDPRLFRASEVLLQNLENPIDPLQEQDALFD-LAHALSNVSGAIISRKTFDYVAAERA 171
           L   P+  R  +++  N + P + L       + L+HAL +  G     +    +AA + 
Sbjct: 130 LEDPPQARRFRQLIALNWDEPGERLLTSSLAHEMLSHALLSQVGVREGLRLKGGLAAHQR 189

Query: 172 R---EFIHSALGRSITLDEMANHAGRDRWALSRDFRLLFGTSPYRYLTMRRLDLVRSLL- 227
           R   EFI   +  +I+L ++A       +  +R FR+ FG  P++Y+  RRL   R LL 
Sbjct: 190 RQLVEFIDHQMAEAISLGQLAGLCALSEYHFARMFRVSFGLPPHQYVLARRLSHARELLR 249

Query: 228 AQGQSLVDAAMTAGFTDQSHMTRQFRSTYGMPPSRW 263
              Q L D A+  GF   SH T +FR   G  P  +
Sbjct: 250 TTSQPLGDIALACGFASASHFTNRFRQALGGTPGEY 285



 Score = 29.6 bits (65), Expect = 8e-05
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 7/80 (8%)

Query: 187 EMANHAGRDRWALSRDFRLLFGTSPYRYLTMRRLDLVRSLLAQGQSLVDAAMTAGFTDQS 246
           EM +HA   +  +    RL  G + ++     R  LV  +  Q    +     AG    S
Sbjct: 162 EMLSHALLSQVGVREGLRLKGGLAAHQ-----RRQLVEFIDHQMAEAISLGQLAGLCALS 216

Query: 247 --HMTRQFRSTYGMPPSRWV 264
             H  R FR ++G+PP ++V
Sbjct: 217 EYHFARMFRVSFGLPPHQYV 236