Pairwise Alignments

Query, 273 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (275), Expect = 3e-29
 Identities = 80/275 (29%), Positives = 126/275 (45%), Gaps = 23/275 (8%)

Query: 8   LDWLHRAPHA-SGLDRIEAYFAGFAFDPHRHDTYAIGRTLMGVQSFHYRGDMVHSLPGTT 66
           +D ++  P A   +  IEA +  FAF+ H H    IG    GVQ F+++G       G  
Sbjct: 4   MDTVNYRPSAYPAISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGV 63

Query: 67  MVLHPDETHDGHAGSDEGFKYRMIYVEPSLIQQILGGKPLPFI---PNGLSTDPRLFRAS 123
           +++ PDE HDGHA S+ G++ ++  +EP  +QQ L    +  +      +  DP LF + 
Sbjct: 64  VLMSPDELHDGHAHSNTGYQVQVFSIEPEWLQQTLEANQIEQVIGFEQLIVQDPTLFHS- 122

Query: 124 EVLLQNLENPIDPLQEQDALFDLAHALSNVSGAIISRKTFDYVAAERA-----------R 172
              LQ L +    L  QD L  LA       G     + + Y+                +
Sbjct: 123 ---LQQLHH----LLRQDNLSQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLALLK 175

Query: 173 EFIHSALGRSITLDEMANHAGRDRWALSRDFRLLFGTSPYRYLTMRRLDLVRSLLAQGQS 232
           E++ S L + I L+++A           R F+   G +PY +L   RL+    LL  G+ 
Sbjct: 176 EWVLSQLDQPIRLEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKP 235

Query: 233 LVDAAMTAGFTDQSHMTRQFRSTYGMPPSRWVKMS 267
             D A   GF DQ+H ++ F++TYG+ PS   + S
Sbjct: 236 GTDVAYQVGFYDQAHFSKAFKATYGLSPSLITRFS 270