Pairwise Alignments

Query, 145 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 438 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  144 bits (364), Expect = 1e-39
 Identities = 77/109 (70%), Positives = 90/109 (82%)

Query: 6   KVVKFATVIIDQVNQEQAVAEAANMAYSTSLQTDNSAQRGTTVVTQAVAVMRDLAKHMQQ 65
           KV+KFATVI DQVN+E AVAEAA +A+ TS  TD SAQRG  VV Q V VM  +A+ MQ 
Sbjct: 246 KVIKFATVITDQVNRELAVAEAATIAFDTSQHTDLSAQRGAQVVQQTVDVMHRIAQQMQD 305

Query: 66  AGEGIEALNAQSQLIGSIVKTLSGIAEQTNLLALNAAIEAARAGEQGRG 114
           A +GIEAL+ QSQLI +I+KT+SGIA+QTNLLALNAAIEAARAG+QGRG
Sbjct: 306 ASDGIEALDKQSQLISAILKTISGIADQTNLLALNAAIEAARAGDQGRG 354