Pairwise Alignments

Query, 406 a.a., type I secretion protein TolC from Pseudomonas simiae WCS417

Subject, 473 a.a., outer membrane protein from Dechlorosoma suillum PS

 Score = 83.2 bits (204), Expect = 1e-20
 Identities = 94/387 (24%), Positives = 153/387 (39%), Gaps = 26/387 (6%)

Query: 23  AQTLTLDSALQTAFANNPDLAAAQWEIDIAQGGRQQAGLIPNPVASWDVEDTRRDSRTTS 82
           A  LT D A+Q A  NN  L AA +++ I +    QAG +PNP  S  +  ++ ++    
Sbjct: 67  ANPLTADDAIQLALYNNRGLQAAFFDLGIGEAELVQAGRLPNPHFSM-LRASKPENGIRE 125

Query: 83  IKISQALELGGKRGARIDVASRVQDAAALTLEQRR----NSLRAEVIDNYYGALRAQERL 138
            KI QAL         + +A  V+       +Q        L AE    YY AL A+E +
Sbjct: 126 YKIEQALTFNIFALITMPLAVEVEKRKFAQAQQLAVIDVARLAAEARQAYYTALAAEESV 185

Query: 139 DLAQRSMTLAERGLVVANGRVTAGKASPVEATRAQVQLSEIRLERDRAQMGLTDAYRRLA 198
              ++    AE G  +A      G  S +  TR Q   ++  L   R++     A  RLA
Sbjct: 186 RYLRKVRQAAEAGAELARRMALVGNFSKLRQTREQAFYADAALNLARSEQSAIAARERLA 245

Query: 199 ASTGSAAPNFQAVATRNPSTLAVPSATQLLARLEQTAELRLAELSILQYEA-----SIGL 253
              G    N   +  R P    +P     L  +EQ A  +  +L  ++ E      ++GL
Sbjct: 246 RVLGLPDRNAIRLPERLPD---LPKTVDELPGVEQAALDQRLDLQAIRLETEALAKNLGL 302

Query: 254 EKAQRIPDLDVSIGSQYDASVRERVSLVG------VSMPIPLFNRNQGNVLAATRRADQA 307
            KA R     +++     A V E     G      +S  +P+F+     V  A     QA
Sbjct: 303 SKATRF----INVLEVGPARVLEGARDSGYKKGYEISFELPIFDWGGSKVAKAESIYMQA 358

Query: 308 RDLRNATELRLRTETRQAVDLWQSANTEVRVFNQQILPAAQSAVDSATRGFEMGKFSFLD 367
            +    + +  R+E R+A   +++     R +  +++P  +   D     +        D
Sbjct: 359 VERAGESAINARSEVREAYHAYRTNYDIARHYRDEVVPLNKRISDENMLRYNGMLIGVFD 418

Query: 368 VLDAQRTLIAARTQYLTATAQATDAWV 394
           +L   RT I +   Y+       D W+
Sbjct: 419 LLADARTQIGSVNSYIET---LRDFWI 442