Pairwise Alignments

Query, 406 a.a., type I secretion protein TolC from Pseudomonas simiae WCS417

Subject, 500 a.a., efflux transporter, outer membrane factor lipoprotein, NodT family from Dechlorosoma suillum PS

 Score = 91.3 bits (225), Expect = 6e-23
 Identities = 111/403 (27%), Positives = 168/403 (41%), Gaps = 41/403 (10%)

Query: 24  QTLTLDSALQTAFANNPDLAAAQWEIDIAQGGRQQAGLIPNPVASWDVEDTR-------- 75
           Q  TL+  ++ A  +N DL  A  +++ A+G  ++AG    P    +    R        
Sbjct: 68  QDATLNDLVRQAQEHNHDLLLAVAQVEEAEGVAREAGAAFFPQIDANASGGRNEISMKTD 127

Query: 76  ----------RDSRTTSIKISQALELGGKRGARIDVASRVQDAAALTLEQRRNSLRAEVI 125
                     RDSR  S+  S  +++ GK   R + A+R Q  ++           A ++
Sbjct: 128 PLPAANTQRLRDSRKASLSTSFEIDVWGKL-RRANEAARAQLLSSRYARDTVELSVASLV 186

Query: 126 DNYYGALRAQER-LDLAQRSMTLAERGLVVANGRVTAGKASPV-----EATRAQVQLSEI 179
            N Y  LRA +  L L + ++   E+ L +   +  AG ASP+     E+T A  Q    
Sbjct: 187 TNAYLTLRAADADLALTRDTVATREKALDIVKSKQEAGSASPLDLHQAESTLATAQAQAA 246

Query: 180 RLERDRAQMGLTDAYRRLAASTGSAAPNFQAVATRNPSTLAVPSATQLLARLEQTAELRL 239
            L R RA      A  +LA  TG       A   R      VP A    + LE   ++R 
Sbjct: 247 SLRRQRAV-----AETQLALLTGKPDLKIAAGDLRQLPLPPVPPAGLPSSLLEARPDIRQ 301

Query: 240 AELSILQYEASIGLEKAQRIPDLDV--SIGSQYDASVRERVSLVG-------VSMPIPLF 290
           AE +++   A IG+ KA   P L +  S+GS+  A      S  G        +MPI  F
Sbjct: 302 AEETLVAANAKIGVAKAALYPSLSLTGSLGSESAALTNLFTSAAGAWSLGLAATMPIFDF 361

Query: 291 NRNQGNVLAATRRADQARDLRNATELRLRTETRQAVDLWQSANTEVRVFNQQILPAAQSA 350
            RN   +  AT +  QA      T      E   A+ +    N E     ++ + A Q  
Sbjct: 362 GRNAARIDQATAKQKQALISYQKTVQTAFKEVNDAL-VGLRENGEGERAQEKRVQATQKT 420

Query: 351 VDSATRGFEMGKFSFLDVLDAQRTLIAARTQYL-TATAQATDA 392
           ++ A   +E G  +FL+VLDAQR+   A   Y+ T  A+ T A
Sbjct: 421 LELAQLRYEAGYSAFLEVLDAQRSANDALLDYVSTRQARLTSA 463



 Score = 28.9 bits (63), Expect = 4e-04
 Identities = 50/235 (21%), Positives = 94/235 (40%), Gaps = 24/235 (10%)

Query: 185 RAQMGLTDAYRRLAASTGSAAPNFQAVATRNPSTLAVPSATQLLARLEQTAELRLAELSI 244
           R +  L +AY     +T  AAP  QA   +    L   +    L R  Q     L  L++
Sbjct: 36  RPEATLPEAY----VATAEAAPAAQAPVEKEWWKLFQDATLNDLVRQAQEHNHDLL-LAV 90

Query: 245 LQYEASIGLEK---AQRIPDLDVSI-GSQYDASVR--------------ERVSLVGVSMP 286
            Q E + G+ +   A   P +D +  G + + S++               R + +  S  
Sbjct: 91  AQVEEAEGVAREAGAAFFPQIDANASGGRNEISMKTDPLPAANTQRLRDSRKASLSTSFE 150

Query: 287 IPLFNRNQGNVLAATRRADQARDLRNATELRLRTETRQAVDLWQSANTEVRVFNQQILPA 346
           I ++ + +    AA  +   +R  R+  EL + +    A    ++A+ ++ +  +  +  
Sbjct: 151 IDVWGKLRRANEAARAQLLSSRYARDTVELSVASLVTNAYLTLRAADADLAL-TRDTVAT 209

Query: 347 AQSAVDSATRGFEMGKFSFLDVLDAQRTLIAARTQYLTATAQATDAWVRIERIYG 401
            + A+D      E G  S LD+  A+ TL  A+ Q  +   Q   A  ++  + G
Sbjct: 210 REKALDIVKSKQEAGSASPLDLHQAESTLATAQAQAASLRRQRAVAETQLALLTG 264