Pairwise Alignments

Query, 406 a.a., type I secretion protein TolC from Pseudomonas simiae WCS417

Subject, 423 a.a., outer membrane protein from Dechlorosoma suillum PS

 Score = 85.5 bits (210), Expect = 3e-21
 Identities = 100/409 (24%), Positives = 170/409 (41%), Gaps = 27/409 (6%)

Query: 15  WVVASAAQAQT-LTLDSALQTAFANNPDLAAAQWEIDIAQGGRQQAGLIPNPVASWDVED 73
           W +++ AQ Q   T++S L  A  NNP+ A+ ++E D A      AG +P+P    ++ D
Sbjct: 19  WSISAGAQVQPGSTVESLLSIARENNPEFASMRYEADAAAERIVPAGALPDPRLRTELMD 78

Query: 74  TRRDSR-----------TTSIKISQALELGGKRGARIDVASRVQDAAALTLEQRRNSLRA 122
             +              T    + Q +   GKR  + ++A      A        + + A
Sbjct: 79  ITKGGAQSPTLAPNRVGTARYTLMQDVPWFGKRDLKREIAELEAAGAKGRAYGVWSEVSA 138

Query: 123 EVIDNYYGALRAQERLDLAQRSMTLAERGLVVANGRVTAGKASPVEATRAQVQLSEIRLE 182
           ++   Y           L Q  + L  R   +A  R   G A+  +  RAQV+ + +R E
Sbjct: 139 KIKTTYAQLYYLARNETLTQEILDLMVRLERIARVRYANGLAAQQDVIRAQVEQTAMRNE 198

Query: 183 RDRAQMGLTDAYRRLAASTGSAAPNFQAVATRNPSTLAV--PSATQLLARLEQTAELRLA 240
               +        R+ A  G  A    + +  +P  L    P A    A L + AE +  
Sbjct: 199 LIALETEHHHLTTRMNALLGRPA----SASLASPEILRPLPPPAKLDYASLVERAEAKNP 254

Query: 241 ELS-----ILQYEASIGLEKAQRIPDLDVS-IGSQYDASVRERVSLVGVSMPIPLFNRN- 293
            LS     I   E S  L    R PD  +  + +Q    V++   +  +++P+   +R  
Sbjct: 255 MLSAEGHRIKAAEKSRDLAYKNRYPDFTLGLVPNQMGNDVKQWDLMFEINIPLQQASRRA 314

Query: 294 QGNVLAATRRADQARDLRNATELRLRTETRQAVDLWQSANTEVRVFNQQILPAAQSAVDS 353
           Q     A   A +AR  R AT  +L ++  +++   ++A    R+    +LP A+    +
Sbjct: 315 QEREAEAMVSASRAR--REATANQLLSDLSESLAALEAAVRTERLSTDNLLPQAELTFKA 372

Query: 354 ATRGFEMGKFSFLDVLDAQRTLIAARTQYLTATAQATDAWVRIERIYGD 402
           A  G+E GK  F  +LDAQR +  A+   + + A+A      +ERI G+
Sbjct: 373 ALAGYETGKVDFTTLLDAQRQIRQAKLNQIKSRAEAQVRLAEVERILGE 421