Pairwise Alignments

Query, 406 a.a., type I secretion protein TolC from Pseudomonas simiae WCS417

Subject, 412 a.a., Outer membrane protein from Sphingomonas koreensis DSMZ 15582

 Score =  105 bits (263), Expect = 2e-27
 Identities = 105/403 (26%), Positives = 171/403 (42%), Gaps = 37/403 (9%)

Query: 18  ASAAQAQTLTLDSALQTAFANNPDLAAAQWEIDIAQGGRQQAGLIPNPVASWDVED---- 73
           A+ AQAQ LT++ A++   A  P  A+    I+     R  AGL P P     VE+    
Sbjct: 18  AALAQAQPLTVEDAIRRTLAAAPQTASTAARIEAQTAARTAAGLRPQPSIDVQVENFGIP 77

Query: 74  --TRRDSRTTSIKISQALELGGKRGARIDVASRVQDAAALTLEQRRNSLRAEVIDNYYGA 131
                D    +   SQ +E GGKR AR+ +A R  D         R  + A+V   Y   
Sbjct: 78  TGNLYDQFQITGMYSQRIERGGKREARVALADREMDVTRAEAIVTRLDVIAQVQRLYVEV 137

Query: 132 LRAQERLDLAQRSMTLAERGLVVANGRVTAGKASPVEATRAQVQLSEIRLERDRAQMGLT 191
              + ++ +A++ +TLA         RV + K       RA   +SE +++ + A     
Sbjct: 138 QATEAQIGIAKQRLTLARMVEAEVKRRVASAKDPLFAGMRATTSVSEAKVDLELATHARD 197

Query: 192 DAYRRLAASTGSAAPNFQAVATRNPSTLAVPSATQLLARLE-------QTAELRLAELSI 244
            A++RL A  G             P+ L+VP+A  L  + E         A+L +     
Sbjct: 198 AAFKRLTAMWGG-----------TPADLSVPAADFLRFKEEPVGPSAPSPADLAVYTARG 246

Query: 245 LQYEASIGLEKAQRIPDLDVSIGSQYDASVRERVSLVGVSMPIPLFNRNQGNVLAATRRA 304
            + +A++ L+ A    D  +S G ++     +   + GVS+P+       G  L+  R A
Sbjct: 247 ARADATVNLQTANAKRDPTLSAGPRF-IGTGDVALVAGVSLPL------GGRRLSDARIA 299

Query: 305 D-QARDLRNATELRLRTETRQ-----AVDLWQSANTEVRVFNQQILPAAQSAVDSATRGF 358
           + QA   R   +L +   TR+      V+  +    E      Q++P A   +     G+
Sbjct: 300 EAQAERRRVDADLAVERFTRERAIALLVEKVEETAHEAEAIRDQVIPNADLTLMEVRVGY 359

Query: 359 EMGKFSFLDVLDAQRTLIAARTQYLTATAQATDAWVRIERIYG 401
             G FS+ DV  AQ TL  AR + + A  +  +A V ++R+ G
Sbjct: 360 NRGFFSYTDVSAAQTTLANARARMVDAVRRHHEARVELDRLTG 402