Pairwise Alignments

Query, 406 a.a., type I secretion protein TolC from Pseudomonas simiae WCS417

Subject, 420 a.a., Outer membrane protein from Sphingomonas koreensis DSMZ 15582

 Score =  149 bits (375), Expect = 2e-40
 Identities = 131/422 (31%), Positives = 194/422 (45%), Gaps = 37/422 (8%)

Query: 1   MAISVKKLLGAGVLWVVASAAQAQT--------LTLDSALQTAFANNPDLAAAQWEIDIA 52
           M + +  LL A      A  AQAQT        +TL+ A++ A A +P  A A   I+ A
Sbjct: 1   MRVMIAALLAAASC---AGIAQAQTPSAEAGDVMTLEEAVRRAGATSPANAVAALGIETA 57

Query: 53  QGGRQQAGLIPNPVASWDVEDTRR-------DSRTTSIKISQALELGGKRGARIDVASRV 105
           +  R+ A L PNP    +V +              T+I  +  LELGGKR ARI VA   
Sbjct: 58  EAERRVAALRPNPTLDAEVGNVIGTGPYRGFSEAETTIGFALPLELGGKRAARIGVADAQ 117

Query: 106 QDAAALTLEQRRNSLRAEVIDNYYGALRAQERLDLAQRSMTLAERGLVVANGRVTAGKAS 165
              A +  +     LR +V   Y  A+ A+ RL +A+  + +    L +A  RV AG  +
Sbjct: 118 TARARIDQQAAIADLRLQVTQAYIEAVTAERRLAIAEDQVRVTAENLRIARDRVMAGANA 177

Query: 166 PVEATRAQVQLSEIRLERDRAQMGLTDAYRRLAASTGSA-----APNFQAVATRNPSTLA 220
           P++  RA +  S    E +RA   +      LA  TG+       P F  VA        
Sbjct: 178 PIDEQRAALLSSNATAEAERAGRTVDTTRTALAHLTGARPSGLDQPWFDRVA-------P 230

Query: 221 VPSATQLLARLEQTAELRLAELSILQYEASIGLEKAQRIPDLDVSIGSQYDASVRERVSL 280
           V +  QL    E T  L  A   +   +A + L ++QR+PDL +S G++   +  +   +
Sbjct: 231 VQAGPQLPVPTEGTLALAAASADLRTADAGLRLARSQRVPDLTLSAGTRRLQASGDMAMV 290

Query: 281 VGVSMPIPLFNRNQGNVLAATRRADQARDLRNATELRLRTETRQAVDLWQSANTEVRVF- 339
            GVSMPIP+FN    N  AA  RA   R+  +A    +R ET +A+   ++      +  
Sbjct: 291 FGVSMPIPVFN----NGRAAVDRAAALRNQSDAQRRLVRFETERAIAAARADRDRAAISV 346

Query: 340 --NQQILPAAQSAVDSATRGFEMGKFSFLDVLDAQRTLIAARTQYLTATAQATDAWVRIE 397
             +   L AAQ A   A  G+  GKF  L +L+A++ L+  RT  + A AQ  DA  R+ 
Sbjct: 347 RGSGPALAAAQEAARIARIGYGEGKFDQLVLLEAEQALLDTRTAAIDARAQYHDAEARLA 406

Query: 398 RI 399
           R+
Sbjct: 407 RL 408