Pairwise Alignments

Query, 406 a.a., type I secretion protein TolC from Pseudomonas simiae WCS417

Subject, 471 a.a., hypothetical protein from Cupriavidus basilensis FW507-4G11

 Score = 95.1 bits (235), Expect = 4e-24
 Identities = 98/380 (25%), Positives = 166/380 (43%), Gaps = 13/380 (3%)

Query: 28  LDSALQTAFANNPDLAAAQWEIDIAQGGRQQAGLIPNPVASWDVEDTRRDSR-----TTS 82
           LD+    A   N DL  A+  +  AQ   + A   PNP      + T          T  
Sbjct: 74  LDTLTLAALYYNADLDTARARLATAQASIKTAAQRPNPSLQLPFQRTLNPKGGDSPWTLG 133

Query: 83  IKISQALELGGKRGARIDVASRVQDAAALTLEQRRNSLRAEVIDNYYGALRAQERLDLAQ 142
           I +   ++  GKRG RID A+    AA L +     S+R+++         A  R DL +
Sbjct: 134 IALDIPIQTAGKRGYRIDQATHFASAARLDVANIAWSVRSQLRTQLLNLWSANARTDLLK 193

Query: 143 RSMTLAERGLVVANGRVTAGKASPVEATRAQVQLSEIRLERDRAQMGLTDAYRRLAASTG 202
           + + L +R   +   RV  G AS  E  + ++ L + + +   AQ   T A R L A+  
Sbjct: 194 QQLELDQRMNTMLEKRVLLGDASARELNQQRLALIQAQADLLNAQR-QTSAARVLIANVL 252

Query: 203 SAAPNFQAVATRNPSTLAVPSATQLLARLEQTAELRLAEL--SILQYEAS---IGLEKAQ 257
                       + +    P A+     +   A L  A++   + QYEAS   + LE A+
Sbjct: 253 GLRSGALDGLDIDLTDFGRPYASLPAPEIRLQALLNRADVLSGLAQYEASQAALQLEVAK 312

Query: 258 RIPDLDVSIGSQYDASVRERVSLVGVSMPIPLFNRNQGNVLAATRRADQARDLRNATELR 317
           + PD+ +  G  +D  +  ++ L   ++ +P+F+RN+G +  A  R  +A       E +
Sbjct: 313 QYPDIHLGPGYTFDQGL-HKLGLDFTNLVLPIFHRNEGPIAEARARRLEAEAQVRRLEAQ 371

Query: 318 LRTETRQAVDLWQSANTEVRVFNQQILPAAQSAVDSATRGFEMGKFSFLDVLDAQRTLIA 377
              ET  A+  +Q+  + V+   +Q+    +  + +A R FE+G+   + +  A+RT +A
Sbjct: 372 ALGETDGAITAYQATRSIVKRNEEQVSMQGRQFL-AARRSFEVGQTDRMALTLAERTELA 430

Query: 378 ARTQYLTATAQATDAWVRIE 397
           AR     A  Q   A  R+E
Sbjct: 431 ARLALQDAEFQMQQAIGRLE 450