Pairwise Alignments
Query, 946 a.a., chromosome partitioning protein ParA from Pseudomonas simiae WCS417
Subject, 1226 a.a., smc-like chromosome partitioning protein (DUF3584) (from data) from Shewanella amazonensis SB2B
Score = 55.8 bits (133), Expect = 2e-11
Identities = 118/584 (20%), Positives = 216/584 (36%), Gaps = 78/584 (13%)
Query: 8 IRRFALLNTAGYSLGLFPLEEPLSVYGANNLGKSASINALQFPILARMSDMSFGKY---- 63
++R L++T + L+ ++ G N GK+ L R+ + +G+Y
Sbjct: 4 LQRIVLIDTHLPGVVELALDGHTNICGTNASGKTT---------LQRLVPVFYGEYPSRV 54
Query: 64 ---TLEQSRRFYFATDTSYILVEVSLPHGPHVIGVVG-RGPGGGFGHQFFAYAGKLDLAH 119
T + R+Y D+SYI+ E G V+ G G G ++F A +LD
Sbjct: 55 VPSTRDSFERWYLPHDSSYIIYEYRRGDGMLYQAVLSSNGDGKGISYRFIAKGFELDDYV 114
Query: 120 YQKND---TCLRQKELFTNLEREGLKAYEL-KPDELRRLLVGGHTSIPLDLTLIPLRSTS 175
+N C EL ++R G+ L E R ++ T + + LRS +
Sbjct: 115 KARNGDALVCHTAAELGREMKRAGIAHTNLLNTREYRAIIQNDRTLLSSGTNRVELRSYA 174
Query: 176 EQ-----SLKTFRAL--FINLLHMREITAAKLKQLFLDAFEHS--------LRSGSVD-- 218
Q + T R + +H +E +K + E + V+
Sbjct: 175 RQFALCDAEHTLRHIEKLAKAVHSKEGKMETVKSMIAAILEEDGVNPPTSRINPQQVENW 234
Query: 219 -----YIAACEEAFRDVRRMEQDYNSLVAAGPLVEALSNGVKQRDILRG----KLHRLSP 269
IA EE + ++EQ++N L++A + L G K ++L + S
Sbjct: 235 IRECQLIAGFEEIRPEFDKLEQEFNQLLSAELRLAGLHKGYKDDEVLEAERQERCQTASK 294
Query: 270 LLDSLLGTWSDYASARKEELTIQAEHYRNEQDALQN------DQRGG--TQELMRLEREI 321
+ L D +++EL + R + ++ DQ G ++ + ++
Sbjct: 295 EYNFRLRQLDDEWKEKRDELNQEISAARGDVSKFEHELEVIEDQHGAFLDADIETAKGDL 354
Query: 322 SGIQRWLGELSVLKHRFALVDDVKVLEQQLLAAKDA-HDELAGALAQSRQFSAEDLDERL 380
+ W +L L R L+ D Q + AA +A ++ L + + +DLD++
Sbjct: 355 EQLPLWRTDLENLSERHKLLTD---KHQDVEAAYNARRSKIVEQLNRDLEVLDQDLDKQR 411
Query: 381 RDLEKRLKSVKQQLDHADNNSYAKLREEFSQQDVERLMRLFNSSLFSLPLGEHGITLDED 440
E++ + + L+ E+F + +E F + L L L +D
Sbjct: 412 DARERQAAAARSDLEKL---------EQFWRDQLEAGKNRFREEEYELKLAASEEKLRQD 462
Query: 441 GQWVKSLEQILDGFKGERFEVPGLSIDISHIEPPALQALADRAALRDQKERLEKELKQLK 500
E++ ER I+ + E A A +R AL ++ RL Q
Sbjct: 463 AVTYTEEEKLNLAVFDER-------IERADEEQEASNANVERLAL--EERRLRSRRDQAS 513
Query: 501 TQQAVASDRAASKTQT-EALYQQVLDAQKALEDFRRAQTLSAEE 543
+AS R + + + L + L +F R + EE
Sbjct: 514 EALRLASIRVSERQNALDELKTMLFPQSHTLLEFLRKEAPGWEE 557
Score = 30.0 bits (66), Expect = 0.001
Identities = 83/406 (20%), Positives = 160/406 (39%), Gaps = 61/406 (15%)
Query: 368 SRQFSAEDLDERLRDLEKRLKSVKQQ---LDHADNNSYAKLREEFSQQDVERLMRLFNSS 424
+RQF+ D + LR +EK K+V + ++ + A L E+ R
Sbjct: 174 ARQFALCDAEHTLRHIEKLAKAVHSKEGKMETVKSMIAAILEEDGVNPPTSR-------- 225
Query: 425 LFSLPLGEHGITLDEDGQWVKSLEQILDGFKGERFEVPGLSIDISHIEPPALQALA---- 480
I + W++ Q++ GF+ R E L + + + L+
Sbjct: 226 ----------INPQQVENWIREC-QLIAGFEEIRPEFDKLEQEFNQLLSAELRLAGLHKG 274
Query: 481 ---DRAALRDQKERLEKELKQLKTQQAVASDRAASKTQTEALYQQVLDAQKALEDFRRA- 536
D +++ER + K+ + D K + + L Q++ A+ + F
Sbjct: 275 YKDDEVLEAERQERCQTASKEYNFRLRQLDDEW--KEKRDELNQEISAARGDVSKFEHEL 332
Query: 537 QTLSAEEGEKLENLAQMEAAQDELKRSSDAFTERVQQLSAKLQLVGRQIGDMEA-----K 591
+ + + G L+ A +E A+ +L++ T+ ++ LS + +L+ + D+EA +
Sbjct: 333 EVIEDQHGAFLD--ADIETAKGDLEQLPLWRTD-LENLSERHKLLTDKHQDVEAAYNARR 389
Query: 592 QRTLDDALRRRQLLPADLPFGTPFMDPVDDSMDNLLPL----LNDYQDSWQGLLRADGQI 647
+ ++ R ++L DL D D+ + L + W+ L A G+
Sbjct: 390 SKIVEQLNRDLEVLDQDL-------DKQRDARERQAAAARSDLEKLEQFWRDQLEA-GKN 441
Query: 648 EALYAQVRLKGVAKFDS--EDDV----ERRLQLLINAYAHRTDEALTLGKARRAAVTDIA 701
+ LK A + +D V E +L L + + R + A +A A V +A
Sbjct: 442 RFREEEYELKLAASEEKLRQDAVTYTEEEKLNLAV--FDERIERADEEQEASNANVERLA 499
Query: 702 RTLRNIRSDYDSLEHQLALFNREINKRQVSNLQSFRIVLAPNKEAL 747
R +RS D L L + +++RQ + L + +L P L
Sbjct: 500 LEERRLRSRRDQASEALRLASIRVSERQ-NALDELKTMLFPQSHTL 544