Pairwise Alignments

Query, 767 a.a., mammalian cell entry protein from Pseudomonas simiae WCS417

Subject, 547 a.a., paraquat-inducible protein B from Vibrio cholerae E7946 ATCC 55056

 Score =  162 bits (410), Expect = 4e-44
 Identities = 99/321 (30%), Positives = 170/321 (52%), Gaps = 15/321 (4%)

Query: 1   MSDLPK--AKTRPASNWSAIWVLPLIALIIGGWLGWRAYSQQGIDIQVRFESGEGIQVNK 58
           MSD P+  A+       SAIW++P++AL +G W+ ++  +  G  I +   + +G++V K
Sbjct: 6   MSDEPQVNAEITAQKQLSAIWIIPILALAMGLWMLFQYVNSTGPKITLILPTADGLEVGK 65

Query: 59  TEVVYKGMPVGKVKALALDDEGNNRGVIATIEMNKDVDQYLKTNTRFWLVKPSVSLAGIT 118
           T++    + VG +  + L ++ ++  ++AT +M+KD D+ L+ +T FW+VKP +   GI+
Sbjct: 66  TQIKALNVNVGVITEIKLSEDYDH--IVATAQMSKDADRMLREDTLFWVVKPRIGREGIS 123

Query: 119 GLETLVSGNYIAASPGDGEPTRKFKALSEEPPLS--DAKPGLHLTVKADRLGSLNRGSPV 176
           GL+TL+SG YI   PG     +    + + PP++  DAK GL L +     G LN G PV
Sbjct: 124 GLDTLLSGAYIQLQPGTASSAQDHFKVMDLPPIAPPDAK-GLRLVLTNKEAGKLNVGDPV 182

Query: 177 FYKQIQVGQVKSYLLSEDQSTVEIKVYIEPTYASLVRKHTRFWNASGISIDANLSGVKVR 236
            Y+   VG+V+S     +    + +++I   Y  LV   + FW  SGI++  N  G++  
Sbjct: 183 MYEGFTVGRVESAQFDVESKKAQYQLFIFAPYDKLVNTRSFFWLNSGINLQLNAEGLEFS 242

Query: 237 SESLSSIVAGGIAFA-TPENRKDSPPTDPSLPFRLYEDFDAAAAGI------RVKVKLTD 289
             S+ S++ GG+ F    E     P T     FRL++D      G+       V +    
Sbjct: 243 LGSIESLLKGGVTFGQLQEEDSGQPITQQLTEFRLFDDVKQIREGMFDDYIEFVMMFDES 302

Query: 290 FEGLQAGRTPVMYKGIQVGSL 310
             GL+    PV Y+G+++G++
Sbjct: 303 VRGLKPS-APVEYRGLRIGTV 322



 Score =  141 bits (355), Expect = 1e-37
 Identities = 92/304 (30%), Positives = 151/304 (49%), Gaps = 10/304 (3%)

Query: 278 AAGIRVKVKLTDFEGLQAGRTPVMYKGIQVGSLKTLKVDPDLSSANAELTLDPLAEDYLV 337
           + G ++ + L   +GL+ G+T +    + VG +  +K+  D     A   +   A+  L 
Sbjct: 46  STGPKITLILPTADGLEVGKTQIKALNVNVGVITEIKLSEDYDHIVATAQMSKDADRMLR 105

Query: 338 QDTQFWVVKPSISLAGITGLEALVKGNYIAIRPGDKGTAPQREFVARAKAPPLDLRSPGL 397
           +DT FWVVKP I   GI+GL+ L+ G YI ++PG   +A Q  F      P     + GL
Sbjct: 106 EDTLFWVVKPRIGREGISGLDTLLSGAYIQLQPGTASSA-QDHFKVMDLPPIAPPDAKGL 164

Query: 398 HMVLFTDNLGSLDVGSPILYKQVKVGSVQSYQFSRKNKQLVIGVHIEKEYENLVNGSTRF 457
            +VL     G L+VG P++Y+   VG V+S QF  ++K+    + I   Y+ LVN  + F
Sbjct: 165 RLVLTNKEAGKLNVGDPVMYEGFTVGRVESAQFDVESKKAQYQLFIFAPYDKLVNTRSFF 224

Query: 458 WNASGVTLTGGLTGGIQVKSESLASLMAGGIAF---ETPEPNVPLKKRIPRFRLFAD--- 511
           W  SG+ L      G++    S+ SL+ GG+ F   +  +   P+ +++  FRLF D   
Sbjct: 225 WLNSGINLQLN-AEGLEFSLGSIESLLKGGVTFGQLQEEDSGQPITQQLTEFRLFDDVKQ 283

Query: 512 -REAA-NQHGTLVTIKVDRADGMRPGTPVRFKGLDVGKIESVDLSADMQSVLLSARITQV 569
            RE   + +   V +  +   G++P  PV ++GL +G +  V L     ++ +S     V
Sbjct: 284 IREGMFDDYIEFVMMFDESVRGLKPSAPVEYRGLRIGTVSKVPLRTRTSNIDISTNRIPV 343

Query: 570 ADRI 573
             RI
Sbjct: 344 LVRI 347



 Score =  126 bits (316), Expect = 3e-33
 Identities = 80/237 (33%), Positives = 119/237 (50%), Gaps = 4/237 (1%)

Query: 516 NQHGTLVTIKVDRADGMRPG-TPVRFKGLDVGKIESVDLSADMQSVLLSARITQVADRIA 574
           N  G  +T+ +  ADG+  G T ++   ++VG I  + LS D   ++ +A++++ ADR+ 
Sbjct: 45  NSTGPKITLILPTADGLEVGKTQIKALNVNVGVITEIKLSEDYDHIVATAQMSKDADRML 104

Query: 575 RAGSQFWVVKPELGLMKTSNLETLVTGQYIEVLPAAKNAGPQKSFVALDQPPEAVHQEAG 634
           R  + FWVVKP +G    S L+TL++G YI++ P   ++  Q  F  +D PP A     G
Sbjct: 105 REDTLFWVVKPRIGREGISGLDTLLSGAYIQLQPGTASSA-QDHFKVMDLPPIAPPDAKG 163

Query: 635 LSLTLSAARRGSLKEGVPVTYREVTVGKVTGYELGQTADRVLIHILIEPKYAPLVRSGSR 694
           L L L+    G L  G PV Y   TVG+V   +    + +    + I   Y  LV + S 
Sbjct: 164 LRLVLTNKEAGKLNVGDPVMYEGFTVGRVESAQFDVESKKAQYQLFIFAPYDKLVNTRSF 223

Query: 695 FWNTSGFGLDFGLFKGATVRTESLETLVAGGIAFATPDGERMGNPARPQQT-FALFD 750
           FW  SG  L     +G      S+E+L+ GG+ F     E  G P   Q T F LFD
Sbjct: 224 FWLNSGINLQLNA-EGLEFSLGSIESLLKGGVTFGQLQEEDSGQPITQQLTEFRLFD 279