Pairwise Alignments

Query, 733 a.a., metal ABC transporter ATPase from Pseudomonas simiae WCS417

Subject, 789 a.a., copper-translocating P-type ATPase (RefSeq) from Shewanella amazonensis SB2B

 Score =  692 bits (1785), Expect = 0.0
 Identities = 375/718 (52%), Positives = 492/718 (68%), Gaps = 13/718 (1%)

Query: 11  ISGMTCASCAGRVERALGKVPGVQSVSVNLANERAHVEVLGQMDPGVLIAAVDKAGYTAT 70
           + GMTCASCAGRVE+AL K+ GV S +VNLA E+  + +L  +    L+AAV  AGY   
Sbjct: 74  VKGMTCASCAGRVEKALMKISGVGSANVNLATEQVSISLLENITNDTLVAAVRDAGYELI 133

Query: 71  LPQSEKATDANQAQRL---QRERWSLLLAILLALPLVLPMLVEPFGLHWMLPAWAQFALA 127
                  ++  Q +RL   Q++ W ++ + +L LPLVLPM+   FG  WMLPA+ Q+ LA
Sbjct: 134 TADEPAQSEPKQDKRLAFYQKDSWPVIGSAILTLPLVLPMIGMLFGADWMLPAFWQWLLA 193

Query: 128 TPVQFIFGARFYIAAWKAVRAGAGNMDLLVAIGTSAGYGLSIYEWLT--AHPGMAPHLYF 185
           TPVQF FG+RFY A W A++AG+GNMDLLVAIGTSA YGLS+Y W +   H G APHLYF
Sbjct: 194 TPVQFYFGSRFYKAGWSALKAGSGNMDLLVAIGTSAAYGLSLYLWYSFDGHHG-APHLYF 252

Query: 186 EASAVVIALVLLGKYLESRAKRQTASAIRALEALRPERAVRVIEGREEDVAINALKLNDL 245
           E+SA V+ LVLLGK LE RAKR+T  A+ ALE L+P  A  + + + + +    L   D+
Sbjct: 253 ESSAAVLTLVLLGKLLEKRAKRRTTDALHALENLKPTTATVLRDAQWQSMPAAQLVSGDV 312

Query: 246 VLVKPGERFPVDGEVVEGQSHADEALISGESLPVPKQPGDNVTGGAINGEGRLLVRTLAL 305
           V V PG+R PVDG V++G SH DEALISGES+P+ K     VTGG++N +G L ++  A+
Sbjct: 313 VKVLPGDRIPVDGLVIKGSSHVDEALISGESIPLHKSLDQKVTGGSVNLDGVLEIKATAV 372

Query: 306 GAESVLARIIRLVEDAQAAKAPIQKLVDKVSQVFVPAVLVLALVTLAGWWLYGAPLETAI 365
           G+ES L++IIRLVE AQ AKAP+Q LVDK+S +FVP VL++A +T+  W LY       I
Sbjct: 373 GSESTLSKIIRLVEQAQGAKAPVQALVDKISSIFVPVVLLIATITVLTWGLYFGDWSQGI 432

Query: 366 INAVAVLVIACPCALGLATPTAIMAGTGVAARHGILIKDAEALERAHEVSAVVFDKTGTL 425
           ++AVAVLVIACPCALGLATP AIMAGTG AARHGIL+KDA ALE+A ++  VVFDKTGTL
Sbjct: 433 LHAVAVLVIACPCALGLATPAAIMAGTGTAARHGILVKDAIALEQATKIDYVVFDKTGTL 492

Query: 426 TSGAPKIAHLTAVDGNEALLLQQAGALQRGSEHPLAKAVLDACNEQGLAVADVTASQSLT 485
           T G P++  +TA D  E +LL+ A  LQ+ SEHPLAKAV+       +++ +VT    + 
Sbjct: 493 TEGKPELVQITAFDDAENVLLEHAYGLQQHSEHPLAKAVISYAIRHQVSLPEVTQFTVVA 552

Query: 486 GRGIAGTLDGRQLALGNRRLLEESGLSAGNLADSAKAWEAEGRTLSWLIE-QGAQPRVLG 544
           G+G+ G + GR+L  G+   + E GLS           + +G ++SWL E   A   + G
Sbjct: 553 GKGVKGEIHGRKLMFGSSHWMRELGLSL-----PTDKIQIKGASISWLAELTDAGVILAG 607

Query: 545 LFAFGDTLKPGALEAVQQLKAQRISSHLLTGDNRGSARVVGEALGIEDVHAEVLPAEKAA 604
           LF F D  KP + +AV+ L+ + I   +LTGD+  SA  +   L +++  AEVLP  KA 
Sbjct: 608 LFCFADKAKPESKQAVKALQQRGIKVAMLTGDSNDSAAQIAAELNLDNYQAEVLPQGKAE 667

Query: 605 TVTELKKTGV-VAMVGDGINDAPALAAADIGIAMGGGTDVAMHAAGITLMRGDPRLVPAA 663
            V + ++ G  VAMVGDGINDAPALA +D+GIAM  GT+VA+ AA ITLMRG+P LV ++
Sbjct: 668 AVAQYQQQGFKVAMVGDGINDAPALAQSDLGIAMATGTEVAVSAAAITLMRGNPELVASS 727

Query: 664 LEISRKTYAKIRQNLFWAFVYNLIGIPLAAFGLLNPVLAGAAMALSSVSVVSNALLLK 721
           L ++  TY  I+QNLFWAF +N +GIPLAA G LNPV+AGAAMA SSV V+SNAL L+
Sbjct: 728 LNLASATYRNIQQNLFWAFAFNTVGIPLAAMGYLNPVIAGAAMACSSVLVISNALRLQ 785



 Score = 59.3 bits (142), Expect = 7e-13
 Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 2/68 (2%)

Query: 4  STTFDLPISGMTCASCAGRVERALGKVPGVQSVSVNLANERAHVEVLGQMDPGVLIAAVD 63
          STT  + + GMTC SCA R+E+AL KV GV + +VNLA E A +E  G    G + +A+ 
Sbjct: 2  STTMHIAVKGMTCVSCASRIEKALLKVNGVVNATVNLATETATIE--GVASTGDIKSAII 59

Query: 64 KAGYTATL 71
           AGY   L
Sbjct: 60 NAGYDVEL 67