Pairwise Alignments

Query, 295 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 291 a.a., cytochrome c oxidase subunit III (RefSeq) from Shewanella amazonensis SB2B

 Score =  353 bits (906), Expect = e-102
 Identities = 172/295 (58%), Positives = 207/295 (70%), Gaps = 7/295 (2%)

Query: 2   SSHDTYYVPAQSKWPIIATFGLLITVYGLGLWFNDLKAARAESHGPWIFFVGGLLLAYML 61
           S H  YYVP+QS WPII   GL +  YG G + + LK+    S G +I   G  ++ +ML
Sbjct: 3   SKHQNYYVPSQSGWPIIGAIGLFLIAYGAGNFVHQLKSGG--SWGGYILLAGVAVILFML 60

Query: 62  FGWFGAVIKESRAGLYSSQMDRSFRWGMTWFIFSEVMFFIAFFGALFYVRHMSGPWLGGE 121
            GWF  V+ ES +GLYSSQMDRSFR GM+WFIFSEVMFF AFFGAL Y R ++ PWLGG 
Sbjct: 61  VGWFRNVVDESMSGLYSSQMDRSFRQGMSWFIFSEVMFFAAFFGALLYARTIAVPWLGGA 120

Query: 122 GHKGIAH-MLWPNFEFAWPLLNNPDPKMYPAPEGTISPWGLPLVNTILLVSSSVTITIAH 180
            +  + H +LWP FE  WPL   PD     A   T    GLPL+NTILL++SS T+  AH
Sbjct: 121 SNNAMTHEVLWPAFEAVWPLETTPDGTKTQAMGWT----GLPLINTILLLTSSFTLHFAH 176

Query: 181 HALRKGHRGALKIWLAITVLLGLAFLGFQAEEYIHAYKELGLTLGSGVYGATFFMLTGFH 240
             L KG R AL +WL +T+LLGL FL  Q EEYIHAY E+GLTL SGVYG TFF+LTGFH
Sbjct: 177 MGLEKGKRTALTLWLGLTILLGLGFLSLQVEEYIHAYTEMGLTLASGVYGNTFFLLTGFH 236

Query: 241 GAHVTIGTVILFVMLMRILKGHFNAEHQFGFEAASWYWHFVDVVWIGLFFFVYVL 295
           G HVT+GT+ L V+  R+LKGHF+ ++QF F+A SWYWHFVDVVW+ LF FVYVL
Sbjct: 237 GLHVTLGTIFLLVLFFRVLKGHFSHDNQFAFQAGSWYWHFVDVVWLCLFVFVYVL 291