Pairwise Alignments

Query, 397 a.a., pilus assembly protein from Pseudomonas simiae WCS417

Subject, 481 a.a., response regulator receiver protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 57.8 bits (138), Expect = 7e-13
 Identities = 82/366 (22%), Positives = 134/366 (36%), Gaps = 64/366 (17%)

Query: 91  DNQLVLNAMRAGARDFVAYGSRSSEVAGLV------RRLSKRLPAVAHSAQLGGLTV-LF 143
           D  L++ AMRAG  +F++   RS EV   +      RR ++     A  A  GG  + + 
Sbjct: 79  DPDLIIRAMRAGVSEFLSQPFRSDEVLAALEGYARRRRTTRAASLAAAPASAGGRLIHIM 138

Query: 144 GTQSNADGAMLATHLALVV-------------QKSGQQ---------------------- 168
           G +       +A +LA++              QK+G+                       
Sbjct: 139 GAKGGVGATTVAVNLAVLAARSLAGNAPAPDAQKAGRSLTKLGGRNAARDMQAMGDTALA 198

Query: 169 -------------TLLLDLGLPRSDSLALLGLESTFNFGDALRHLRRLDSTLINSAFTTA 215
                          L+D+ LP+ D    L +E +  + D  R+L RLD+T + S     
Sbjct: 199 TGGPAHAPAALPLAALMDMRLPQGDVPLFLDMEYSRTWADGARNLGRLDATFLRSLAERH 258

Query: 216 LDGLRILAYATGDEPLKLTSAAELFMLLSALRQHFQHIVVNITGQPDSEALRTFVSHCDK 275
             GL + A     + L   S   +  +L   R  +   VV+     D  AL   +   + 
Sbjct: 259 ASGLEVFASPDTGDDLDAISPRAVKAVLDLARALYAVTVVDGGPYADELAL-VSMQEAET 317

Query: 276 LLWCTDQSVLDCRRNLAVLNRWREKGMKL-DHAKLVVDRYIKACAPDIEALEKSFGLACI 334
           +L  TD ++        +L+        +    +LVV+R       D+   E+       
Sbjct: 318 ILLVTDLALPALAGARRLLDDVAAAAPAVAARIQLVVNRMSPQAGVDLTEAERLLERKVF 377

Query: 335 AVLPLSAELRLNVKNQGQPLFALAPREPLTQAVRTLGELLAKRS----EGLAKPSMR--- 387
           A +       ++  NQG PL   APR    +++  L E LA  +     G   P M+   
Sbjct: 378 ATVSDDYGAAVSAINQGVPLCEAAPRSVAARSLAKLAERLAPAAATPGNGGTAPGMKAGS 437

Query: 388 WFERLL 393
            F RLL
Sbjct: 438 LFARLL 443