Pairwise Alignments

Query, 423 a.a., ATPase from Pseudomonas simiae WCS417

Subject, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

 Score =  130 bits (328), Expect = 8e-35
 Identities = 85/270 (31%), Positives = 142/270 (52%), Gaps = 4/270 (1%)

Query: 66  RLAISRYEMERLAEEIVDELTGFGPLEVLLRDPSVTEILVNGPHRV-FIERDGLLHQSDL 124
           ++ I++ E ++    +  +L G G LE + RDP + +I V G      + +   +  S++
Sbjct: 143 KININKSERDKFLYLLKRDLIGLGTLEPIKRDPYIEDIHVIGAKNCQLVHKIYDMLPSNI 202

Query: 125 RFIDDHHVERVMQRILAPLGRRLDESSPMVDARLPDGSRVNAIIP-PIALDGPCLSIRKF 183
            + D+  +   ++ +   +GR + +++P+VD  LPDGSR+N +    ++L GP  +IRKF
Sbjct: 203 EWEDEGDISNYLKNMCERIGRPVSDATPIVDGSLPDGSRINILYSGDVSLKGPSFTIRKF 262

Query: 184 RKDMLKSTDLVAMQTIDQSIFEFFQEAVGKRCNILISGGTGTGKTTLLNILSQLINPHER 243
               +  T +++  T+      +    +    +I I G T +GKTT LN +   I P  +
Sbjct: 263 TDVPISITQIISWGTMSAQTAAYLWLCLEYGMSIFICGETASGKTTSLNAILPFIKPKSK 322

Query: 244 LVTIEDVAELQLGHPHVVRLETRPPNAEGHGEVRSSDLIRNALRMRPDRIILGEIRGVEV 303
           + + ED +E++  +P   +L TR    E    V   DL+R ALR RP+ II+GEIR VE 
Sbjct: 323 IFSCEDTSEVKPPNPVWQQLLTRERGPE-ESRVTLFDLLRAALRSRPNYIIVGEIRSVEG 381

Query: 304 LDVMTAMNTGHDGSMSTVHANNAQDALLRL 333
                AM TGH   +ST HA N +  + RL
Sbjct: 382 AVAFQAMQTGHP-VISTFHAANVRKMIQRL 410