Pairwise Alignments

Query, 293 a.a., type II secretion system protein F from Pseudomonas simiae WCS417

Subject, 294 a.a., type II secretion system protein from Pseudomonas syringae pv. syringae B728a

 Score =  342 bits (876), Expect = 8e-99
 Identities = 167/289 (57%), Positives = 223/289 (77%)

Query: 5   VLLLICLLLIALSFWQFHHGLRKARTDRVLERLGDGQPETQEPSTTWTGLEHMFQRAGLG 64
           VL LI LLL   S   F+  L +  ++RV +RL  GQ +     T W+ L+  F RAGLG
Sbjct: 6   VLGLISLLLFIASIRMFYLALNQGASERVRQRLMAGQVQPVAEKTGWSYLDRAFLRAGLG 65

Query: 65  KPTDRLGLWLSAWVVGVLLGWLLADGLGLIAMIVGPPLLLRVYISWRYQRRVQRMVEQLP 124
           +PT R+GL LS + + +L+G+ +A  +G +++++  PL LRV++SWRY+ RV+RM++QLP
Sbjct: 66  QPTKRMGLALSLYALLILIGYAMAGVVGALSVLLAVPLTLRVFVSWRYEVRVRRMIQQLP 125

Query: 125 QLLDHSVRSLKSGRTLADSVLGGIEGVEAPLKDAMGRVQRNVRMGVSLPDSVSDFAEFYE 184
           QLLDH+VRSLKSGRTLAD+VL GI+  + PLKD M R++RNV++GVSLPD+  DFAE YE
Sbjct: 126 QLLDHTVRSLKSGRTLADAVLHGIDATDQPLKDGMSRIERNVQLGVSLPDAARDFAELYE 185

Query: 185 QDEFRLFALGLKVNHRYGGNASELLENLIKMIREREQGARQLKAMTGETRMTAYVLGGLP 244
           +DEF LFA+GL+VNHRYGGNASEL+ENLIK+IR+REQ  RQL+AMTGETRMTA VL  LP
Sbjct: 186 RDEFHLFAIGLRVNHRYGGNASELMENLIKLIRDREQAGRQLRAMTGETRMTAVVLALLP 245

Query: 245 VLIVGYFMMVNPSYLMTMWNDDTGRIMLFSALAMDLGGTFVMWRMLRSV 293
           + + GYF+ VNPSYL+ MW+D++G+IML  A A+ + G  V+WRMLRS+
Sbjct: 246 ISMAGYFLAVNPSYLLHMWDDESGKIMLSVAFALQVTGCVVLWRMLRSI 294