Pairwise Alignments

Query, 295 a.a., type II secretion system protein F from Pseudomonas simiae WCS417

Subject, 321 a.a., Pilus assembly protein from Sinorhizobium meliloti 1021

 Score = 61.2 bits (147), Expect = 3e-14
 Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 3/227 (1%)

Query: 65  DNETQTLLNRVGWRKASQRSLFAAFQIGTPIVSLGLTLLGQQLLFPHATPVW--IASMFA 122
           D E    L+  G+R  +  + F AF++  P+      LL   L+     P+   +A   A
Sbjct: 92  DGEIVRKLSMAGYRGHAAVTAFLAFRLIAPVAIFAACLLYILLVVRPEAPLLLVVAMAAA 151

Query: 123 LG-IGYLLPKRVLAAAAKHRQQTIAKEVSTFIPLLRILFESGMAVEQSLRVLSNEAQRLL 181
           +G +GY  P   +      RQQ+I +     + LL I  E+GM +E + R +  E     
Sbjct: 152 MGALGYFSPAIFVRNRITKRQQSIRRSWPEALDLLLITVEAGMGIESAFRKVGEEIGTQS 211

Query: 182 PALTHELRLILARVDSGLELGEELGKTARLLEVDEFTDTCIILQQLIHQGGGAMKSLLAL 241
           P    E+ L  A +    +  +      +   V+        L Q    G    ++L  +
Sbjct: 212 PETAEEILLTTAELSYLQDRRQAFENLGQRTGVEGVRAVVTSLIQAEKYGTPLGQALRVM 271

Query: 242 KQLLDDRRLTRLQEYISKMSAKMSVVMMVFLFPALLIVLGGPAFIGI 288
            Q   D R++  ++  + +  K++V M++F  P L  V+  PA I I
Sbjct: 272 AQENRDMRMSEAEKRAAALPPKLTVPMILFFLPVLFAVIITPAVIQI 318