Pairwise Alignments

Query, 908 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 429 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  112 bits (281), Expect = 4e-29
 Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 42/277 (15%)

Query: 664 NTEVRRSQQQLTQSAKMATLGEMATGLAHEINQPLNVMR-------------MAIVNVLK 710
           N ++  +Q QL QS KM  +G++A G+AHEIN P+  +              + ++N  +
Sbjct: 155 NKKLEAAQNQLLQSEKMVAIGQLAAGVAHEINNPIGFVNSNLQSLQDYNNKLLKLLNFYQ 214

Query: 711 RLSNGDAQIDYLT---EKLQRIDTQ----------------VQRAARVVDHMRVFGRRSE 751
           +L++    + Y T   + L+R   +                + R A +V  ++ F     
Sbjct: 215 KLTHKIGSVPYFTLEQDMLKRYQFEFICSDLPDLIRESIEGLDRVAVIVKSLKSFSHVDS 274

Query: 752 IEQQPFDPSQAVEGTLSLLGDGLRGKGVDVRITPADFTVQVKGHVDQLEQVLINLMVNAR 811
            E Q  +  + +E TL +  + ++ K V +R    D   ++     QL QV +NL+VNA 
Sbjct: 275 SEWQYANVIEGIENTLKIAANQIKYKAVVLR-NFQDNLPELYCQPMQLNQVFLNLLVNAA 333

Query: 812 DALLSKRQKDPEFRPWIAVHCEHDSRHVRIWVEDNGDGIDPRLLERIFEPFFTTKPIGVG 871
            A+        E R  I++          I + D G GI    L +IFEPF+TTK +G G
Sbjct: 334 QAI--------EERGEISIDVSASDAEFIIVIRDTGSGIAASDLRKIFEPFYTTKLVGTG 385

Query: 872 TGLGLSVSYGIVENMGGRLSVANA-EQGARFCVELPI 907
           TGLGLS+SY IV+   G + V++   +G  F V LPI
Sbjct: 386 TGLGLSLSYSIVQKHKGEIKVSSVLGEGTAFTVILPI 422