Pairwise Alignments

Query, 528 a.a., cytochrome oxidase subunit I from Pseudomonas simiae WCS417

Subject, 593 a.a., alternative cytochrome C oxidase polypeptide I transmembrane protein from Sinorhizobium meliloti 1021

 Score =  408 bits (1048), Expect = e-118
 Identities = 222/520 (42%), Positives = 296/520 (56%), Gaps = 24/520 (4%)

Query: 23  RWVLTTNHKDIGTLYLWFAFAMFLLGGSFAMVIRAELFQPG-LQIVQPAFFNQMTTMHGL 81
           R+V + + K I   Y   A A+ ++    + +IR +L  PG  +++    + Q  TMHG+
Sbjct: 32  RYVFSQDAKIIAIQYSMTAIAIGMVALVLSWLIRLQLGFPGTFELIDAERYYQFITMHGM 91

Query: 82  IMVFGAVMPAFVG-LANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFTPGGGP 140
           IMV   +   F+G   N++IPLM+GA DM  P  N  S+W+   A ++L ++ FTPGG  
Sbjct: 92  IMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYANMLSYWIYLLAVIVLAASFFTPGGPT 151

Query: 141 NFGWTFYAP---LSTTYAPES--VTFFIFAIHLMGISSIMGAINVVATILNLRAPGMTLM 195
             GWT Y P   LS T       +   + ++ +  I   MG +N V T+L  RA GMTLM
Sbjct: 152 GAGWTLYPPQAVLSGTPGGRDWGIIMMLSSLIIFVIGFTMGGLNYVVTVLQGRARGMTLM 211

Query: 196 KMPLFVWTWLITAFLLIAVMPVLAGCVTMMLMDIHFGTSFFSAA----------GGGDPV 245
           ++PL VW       + +   P L     MML D   GTSFF  A          GGG P+
Sbjct: 212 RLPLTVWGIFTATVMALLAFPALFVACVMMLFDRLLGTSFFMPAIVEMGEQLQYGGGSPI 271

Query: 246 LFQHVFWFFGHPEVYIMILPAFGAVSSIIPTFSRKPLFGYTSMVYATASIAFLSFIVWAH 305
           LFQH+FWFFGHPEVYI+ LPAFG VS +I T +RK +FGY  MV+A   I  LSFIVWAH
Sbjct: 272 LFQHLFWFFGHPEVYIVALPAFGIVSDLISTHARKNIFGYRMMVWAIVIIGGLSFIVWAH 331

Query: 306 HMFVVGIPLVGELFFMYATLLIAVPTGVKVFNWVSTMWQGSLTFETPMLFAVAFVILFTI 365
           HM+V G+      FF   TL+IAVPT +KV+NWV T+W+G++    PMLFA+AF++ F  
Sbjct: 332 HMYVSGMNPYFGFFFATTTLIIAVPTAIKVYNWVLTLWRGNIHLTLPMLFALAFIVTFVN 391

Query: 366 GGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLG 425
           GG +GL L     D    DT FVVAHFH V+    I  IF + Y+W PK TG M +E +G
Sbjct: 392 GGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVAPIMVIFGAIYHWYPKITGRMLNEAMG 451

Query: 426 KLHFWLSFVGMNMAFFPMHFVGLAGMPRRVPD------YNLQFADFNMVSSVGAFMFGAT 479
           ++HFW++F+G    FFPMH++GL G+PRR  +           A+ N   SV A + GA 
Sbjct: 452 QIHFWVTFIGAYAIFFPMHYLGLIGVPRRYHELGEASFVTTSIAELNAFISVMALLVGAA 511

Query: 480 QIFFLFIVIKCIRGGTPAPAKPWDGAEGLEWSIPSPAPYH 519
           QI FLF +   +R G  A   PW  A  LEW  P   P H
Sbjct: 512 QIVFLFNLAWSLRHGREAGGNPW-RATTLEWQTPETPPPH 550