Pairwise Alignments

Query, 528 a.a., cytochrome oxidase subunit I from Pseudomonas simiae WCS417

Subject, 496 a.a., Cytochrome c oxidase cbb3-type, subunit I (NCBI) from Rhodospirillum rubrum S1H

 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 91/432 (21%), Positives = 176/432 (40%), Gaps = 41/432 (9%)

Query: 54  VIRAELFQPGLQI-VQPAFFNQMTTMHGLIMVFGAVMPAFVGLANWMIPLMIGAPDMALP 112
           VI  +L  P L + ++   F ++  +H   +VF       +G + +++     A      
Sbjct: 42  VIAWQLAFPSLNMDLEWTSFGRLRPLHTSAVVFAFGGNVLLGTSLYVVQRTSRASLYGGA 101

Query: 113 RMNNFSFWLLPAAFLLLVSTLFTPGGGPNFGWTFYAPLSTTYA-PE-SVTFFIFAIHLMG 170
            + N  FW     F+++ +           G+         YA PE  V  F+  + ++ 
Sbjct: 102 ALGNIIFWGYQL-FIVMAA----------LGYVLGVTQGKEYAEPEWFVDLFLTVVWVLY 150

Query: 171 ISSIMGAINVVATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAG--CVTMMLMD 228
           +++ +G      T+L  R P        ++V  W   A ++   +  L     + + LM 
Sbjct: 151 LAAFLG------TLLKRREPH-------IYVANWFFLAMIITIALLHLGNNMAIPVALMG 197

Query: 229 IHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAF-GAVSSIIPTFSRKPLFGYTS 287
              G S+  + G    V      W++GH  V   +   F G +   +P  +++P++ Y  
Sbjct: 198 ---GDSWVKSYGFYSGVQDAMTQWWYGHNAVGFFLTAGFLGIMYYFVPKQAQRPVYSYRL 254

Query: 288 MVYATASIAFLSFIVWAHHMFVVGIPLVGELFFMYATLLIAVPTGVKVFNWVSTM---WQ 344
            +    ++ FL      HH+    +P   +   M  ++++ +P+   + N + T+   W 
Sbjct: 255 SIVHFWALIFLYIWAGPHHLHYTALPDWAQTVGMVFSVMLWMPSWGGMINGLMTLSGAWD 314

Query: 345 GSLTFETPMLFAVAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGI 404
             L  +  + F V  V  + +  F G M++I   +   H T + + H H   +    F  
Sbjct: 315 -KLRTDPVLRFLVVSVGFYGMSTFEGPMMSIKAVNSLSHYTDWTIGHVHSGALGWVAFVS 373

Query: 405 FASAYYWLPK-WTGH-MYDETLGKLHFWLSFVGMNMAFFPMHFVG-LAGMPRRVPDYNLQ 461
           F + YY +P  W    +Y   L  LHFW++ +G+ +    M   G + G+  R  D  L 
Sbjct: 374 FGALYYLVPALWKRRSLYSLKLVSLHFWIATLGIVLYITSMWVSGIMQGLMWRAYD-ELG 432

Query: 462 FADFNMVSSVGA 473
           F  ++ + SV A
Sbjct: 433 FLQYSFIESVAA 444