Pairwise Alignments

Query, 249 a.a., SAM-dependent methyltransferase from Pseudomonas simiae WCS417

Subject, 260 a.a., tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM from Vibrio cholerae E7946 ATCC 55056

 Score =  153 bits (386), Expect = 4e-42
 Identities = 93/250 (37%), Positives = 138/250 (55%), Gaps = 9/250 (3%)

Query: 3   DRHFDQLATRFAEKIYGGAKGAIRLAVLQADLTEALP-----KRPLRVLDIGAGLGHMSL 57
           DR+FD +A +FA+ IYG  KG IR  ++  DL + L      K PL VLD G GL  +S 
Sbjct: 4   DRNFDDIAHKFAKNIYGSDKGEIRQVIVWEDLEQLLSQLDTQKVPLHVLDAGGGLAQVSQ 63

Query: 58  WLAEQGHEVTLAEPAEPMLEGARQRFADAG--QTATFIHAPWQDLLGQLTEPYDLVLCHA 115
            +A  GH VTL + +  ML+ A Q  A+ G  +   F+H+P Q +   L  P DLVL HA
Sbjct: 64  KIARLGHRVTLCDLSSEMLQLAEQDIANNGLLEQYRFVHSPVQTIQAHLDAPVDLVLFHA 123

Query: 116 VLEWLAEPHAILPVLHQLTVPGGWLSLAFYNRDALIYRNLLKGHFRKMRKNDMAGEKQSL 175
           V+EWLAEP   L  L     PGG +S+ FYN   L+Y+N + G+   + ++    ++  L
Sbjct: 124 VMEWLAEPKPALQNLLAQVRPGGMVSVMFYNYHGLVYKNAVCGNIPHVLEDMPHRKRFKL 183

Query: 176 TPQQPLDPRELAAQL-EGLWQVESQSGVRVFHDYM-PVEFQARADLQDLLEMELAHRRHP 233
            PQ+ L P E+   + E  +++  +SG+R F DY+  ++       +DL+ +E    R  
Sbjct: 184 QPQKGLLPEEVYQWIEESSFEICGKSGIRCFSDYIGNMKNMGEYQYEDLVALERKFCRQE 243

Query: 234 SFAGLGRYLH 243
            +  LGRY+H
Sbjct: 244 PYLSLGRYIH 253