Pairwise Alignments

Query, 763 a.a., penicillin-binding protein 1C from Pseudomonas simiae WCS417

Subject, 712 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  202 bits (513), Expect = 7e-56
 Identities = 168/539 (31%), Positives = 244/539 (45%), Gaps = 42/539 (7%)

Query: 28  VLAEDGTPLWRFADANGVWRYPVQTHEVSPYYLDALLTYEDRWFYQHPGVNPLALARATW 87
           +L+ D T L +   A    R  V   ++      A L  EDR FY+H G++   +ARA+ 
Sbjct: 32  ILSADNTVLQKIGPAT---RDKVPFKQIPLRLRQAFLAAEDRRFYEHSGIDLFGIARASV 88

Query: 88  QNLTGARVVSGGSTLSMQVARLLD-PHSRTFHGKLRQLWRTAQLEWHLSKAEILNLYLNR 146
            NL   +V  G ST++ Q+AR++     R+   KL +     +LE  L+K +IL  YLN 
Sbjct: 89  TNLLSGQVQEGASTITQQLARIVFLSQERSLQRKLNEALMAQKLEQELTKDQILEQYLNL 148

Query: 147 APFGGTLQGVAAASWAYLGKSPSQLTHAEAALLAVLPQAPSRLRPDRHPQRAQEARDKVL 206
              G    GVA A+W Y  K    L+  E A LA LP AP+   P    + AQE R+ VL
Sbjct: 149 VYLGAGAYGVADAAWTYFSKPVQDLSLGEMATLAGLPPAPTAYSPLVSLEVAQERRNSVL 208

Query: 207 RRLAEFQVWPQSAVDEALEEPLLL---APRLEPSLAP----LLARRLNRPDSPPL----- 254
            R+ E      S  + A  EPL L   AP+   SLAP     + + L R  +P +     
Sbjct: 209 SRMQEVGFITPSEAEAARREPLALKPAAPKYAQSLAPYFTDYVRQELPRFVAPDVLEYGG 268

Query: 255 --IRTTLDATLQRRLEDLLLGWRARLPEHTSAAILVVEEESMAVRAYLGSVDINDAKRFG 312
             ++TTL+   Q+  +  +   +         A++ ++    A+RA +G VD N   +F 
Sbjct: 269 LTLKTTLNYRWQQAADQAI---QNSTYGSLQGALVSIDPRDGAIRAMVGGVDFN-RSQFN 324

Query: 313 HVDMISALRSPGSTLKPFLYGMALDDGLIHSESLLQDVPRRYGDYRPGNFSMGFTGAVPA 372
                 A R PGST K F+Y  A+  G+  S+  L D     G Y+P NFS  F+G++  
Sbjct: 325 RA--TQAYRQPGSTFKMFVYAAAIASGMSPSQVYL-DAAINLGGYKPQNFSRSFSGSISL 381

Query: 373 STALSSSLNLPAVQLLEAYGPKRFAAEMRIGGVPLALPALAEPNLALILGGAGSRLEDLV 432
           + AL++S+N+ A+++L   G        R  G+   L         L LG +   L ++ 
Sbjct: 382 TQALTNSVNIVAIKVLRDVGIDNVIRVARQMGIRADLARY----YPLALGASDVTLLEIT 437

Query: 433 SGYSAFARDGKSATLR------------LQPDDTLRERPLLSPGSAWIVRRILSGQARPD 480
           S Y   A  GK  T              L  D  ++    L PGSA IV  +L       
Sbjct: 438 SAYGTLANQGKYLTPHPIAEIIDHRGRVLYQDKQIKPVQALDPGSAAIVTSMLERVVTSG 497

Query: 481 RDPRAELVQRPVLAWKTGTSYGFRDAWAIGVGPRYLIGVWIGRPDGTPVPGQFGLASAA 539
               A L  R V A KTGT+   RD W IG  P+ + GVW+G  +  P       A+ A
Sbjct: 498 TGAAAYLPDRAV-AGKTGTTEQARDLWFIGYIPQLVTGVWLGYDNFAPTGSGSSAAAVA 555