Pairwise Alignments

Query, 763 a.a., penicillin-binding protein 1C from Pseudomonas simiae WCS417

Subject, 817 a.a., penicillin-binding 1A transmembrane protein from Sinorhizobium meliloti 1021

 Score =  102 bits (254), Expect = 8e-26
 Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 4/176 (2%)

Query: 62  ALLTYEDRWFYQHPGVNPLALARA---TWQNLTGARVVSGGSTLSMQVAR-LLDPHSRTF 117
           A ++ ED+ FYQHPG++   LARA     QN    R   G ST++ QVA+  L    +T 
Sbjct: 82  AFISAEDKNFYQHPGIDVTGLARAIAVNLQNFGSGRRPVGASTITQQVAKNFLLSSDQTL 141

Query: 118 HGKLRQLWRTAQLEWHLSKAEILNLYLNRAPFGGTLQGVAAASWAYLGKSPSQLTHAEAA 177
             K+++   + ++E   SK  IL LYLN   FG    G+A A+  Y  KS ++LT AE A
Sbjct: 142 DRKIKEAILSFRIEQAYSKDRILELYLNEIFFGLNSYGIAGAALTYFDKSVTELTIAETA 201

Query: 178 LLAVLPQAPSRLRPDRHPQRAQEARDKVLRRLAEFQVWPQSAVDEALEEPLLLAPR 233
            LA LP+ P+   P R  + A E R+ V+ R+ E     ++  +EA ++PL + PR
Sbjct: 202 YLAALPKGPANYHPFRKVEAAIERRNWVIDRMVENGYVTKADGEEAKQQPLGVKPR 257



 Score = 70.5 bits (171), Expect = 3e-16
 Identities = 76/304 (25%), Positives = 122/304 (40%), Gaps = 44/304 (14%)

Query: 274 WRARLPEHTSAAILVVEEESMAVRAYLGSVDINDAKRFGHVDMISALRSPGSTLKPFLYG 333
           +R R P      ++ ++  +  V A +G      ++ F       A+R PGS  KPF+Y 
Sbjct: 430 YRLRQPPKVQGGLVAMDPHTGRVLAMVGGFSYGQSE-FNRATQ--AMRQPGSAFKPFVYA 486

Query: 334 MALDDGLIHSESLLQ---DVPRRYGDYRPGNFSMGFTGAVPASTALSSSLNLPAVQLLEA 390
            ALD+G   +  +L    ++      +RP N+  G  G       +  S NL  V+L   
Sbjct: 487 AALDNGYTPASVILDAPIEIVAGGQVWRPENYGGGSAGPSTLRLGIEKSRNLMTVRLAND 546

Query: 391 YGPKRFAAEMRIGGVPLALPALAEPNLALILGGAGSRLEDLVSGYSAFARDGK----SAT 446
            G    A      G+   +     P LA+ LG   + +  LVS Y+  A  GK    S  
Sbjct: 547 LGMNIVAEYAERFGIYDKM----APLLAMSLGSGETTVLRLVSAYAVIANGGKQIKPSLI 602

Query: 447 LRLQ--------------------PDDTLRERP--------LLSPGSAWIVRRILSGQAR 478
            R+Q                     D   +E P        +L P +++ +  ++ G   
Sbjct: 603 DRIQDRYGKTIFRHEDRACENCNADDWEAQEEPVLIDNREQVLDPMTSYQITSMMEGVVA 662

Query: 479 PDRDPRAELVQRPVLAWKTGTSYGFRDAWAIGVGPRYLIGVWIGRPDGTPV-PGQFGLAS 537
                    + RPV A KTGT+   +DAW +G  P  + G+++G  D  P+  G  G   
Sbjct: 663 RGTAAGKIKLDRPV-AGKTGTTNDEKDAWFVGYTPDLVAGLYLGFDDPAPLGRGATGGGL 721

Query: 538 AAPL 541
           +AP+
Sbjct: 722 SAPI 725