Pairwise Alignments

Query, 763 a.a., penicillin-binding protein 1C from Pseudomonas simiae WCS417

Subject, 713 a.a., bifunctional penicillin-binding protein from Sinorhizobium meliloti 1021

 Score =  388 bits (996), Expect = e-112
 Identities = 237/551 (43%), Positives = 314/551 (56%), Gaps = 18/551 (3%)

Query: 3   LVVVVLWGADRVWPLPLPQ-DDLARVVLAEDGTPLWRFADANGVWRYPVQTHEVSPYYLD 61
           L V  L  ADR +P PL + D ++  VL  DG  L  FA  +G+WR      +V P +++
Sbjct: 39  LAVFTLEWADRTFPPPLSEADTVSAEVLDRDGRLLRAFAAKDGLWRLKTTAQDVDPRFIE 98

Query: 62  ALLTYEDRWFYQHPGVNPLALARATWQNLTGARVVSGGSTLSMQVARLLDPHSR-TFHGK 120
            L+ YED+ F +H GV+PLALARA  Q +T  R+VSG STLSMQVARL++P  R T   K
Sbjct: 99  MLIAYEDQRFREHHGVDPLALARAALQFVTNGRIVSGASTLSMQVARLIEPRERRTLGAK 158

Query: 121 LRQLWRTAQLEWHLSKAEILNLYLNRAPFGGTLQGVAAASWAYLGKSPSQLTHAEAALLA 180
           L Q+ R  Q+E  L K EIL+LYL  AP+GG L+GV AAS A+ GK P +L+  EAALL 
Sbjct: 159 LLQVARAIQIERRLGKDEILDLYLTHAPYGGNLEGVRAASLAWFGKEPRRLSAGEAALLV 218

Query: 181 VLPQAPSRLRPDRHPQRAQEARDKVLRRLAEFQVWPQSAVDEALEEPLLLAPRLEPSLAP 240
            LPQ P + RPDR+   A+ AR +VL R A  +V  +   + A    +       P+ A 
Sbjct: 219 ALPQLPEKRRPDRNLAAAEAARKRVLARAAVARVIGEGEAERAAMTAIPTRRLQLPAHAA 278

Query: 241 LLARRLNRPDSPPLIR---TTLDATLQRRLEDLLLGWRARLPEHTSAAILVVEEESMAVR 297
            LA    R D  P  R   TTL   +QR LE +     ARL    S A+++ +  +  + 
Sbjct: 279 HLAEAARRKD--PAGRRHPTTLSRNIQRSLEGVAREGAARLGPKVSVAMVMADIRTGEIV 336

Query: 298 AYLGSVDINDAKRFGHVDMISALRSPGSTLKPFLYGMALDDGLIHSESLLQDVPRRYGDY 357
             +GS D  DA R G +DM    RSPGSTLKPF+YG+A ++GL+  E++++D P  +  Y
Sbjct: 337 GEVGSADYFDASRSGWIDMSRITRSPGSTLKPFIYGLAFEEGLVSQETIIEDRPADFFGY 396

Query: 358 RPGNFSMGFTGAVPASTALSSSLNLPAVQLLEAYGPKRFAAEMRIGGVPLALPALAEPNL 417
           RP NF M + G V    AL  SLN+PA++LL+A GP R     R   V   LP    P L
Sbjct: 397 RPRNFDMNYQGDVTVRQALQLSLNVPAIRLLDAVGPSRLMVRFRRADVRPKLPPHEAPGL 456

Query: 418 ALILGGAGSRLEDLVSGYSAFARDGKSATL----RLQPDDTLRERPLLSPGSAWIVRRIL 473
           A+ LGG G  L +LV  Y+  A  G    L       P  T  E PLLS  +AW V  IL
Sbjct: 457 AIGLGGVGITLHELVQLYAGLANQGWPVRLGDGIEGVPGPTDGE-PLLSTVAAWHVADIL 515

Query: 474 SGQARPDRDPRAELVQRPVLAWKTGTSYGFRDAWAIGVGPRYLIGVWIGRPDGTPVPGQF 533
           S    P         +R  +A+KTGTSYG+RDAW++G   RY++GVW+GRPD   VPG  
Sbjct: 516 SDVLPPAGS------RRHGIAYKTGTSYGYRDAWSVGFDGRYVLGVWVGRPDNGAVPGLT 569

Query: 534 GLASAAPLMLQ 544
           G  +AAP++ +
Sbjct: 570 GYGAAAPILFE 580



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)

Query: 683 IVGVREGDQLRLPAASQQALR-LKISALGGSGRRWWFLNGAPLGDSANQDFINASFEHLG 741
           IV   EG ++ L A     +  L +   GG     W  NG PL D A +       +  G
Sbjct: 633 IVFPPEGARVELGAQGDGVITPLTLKLQGGRAPFRWLANGRPLPDVARRRVSQWQPDGGG 692

Query: 742 RYQLSVLDEAGQTARLEFSV 761
              L+V+D  G+ A +   V
Sbjct: 693 YSTLTVIDALGRAASVRVFV 712