Pairwise Alignments

Query, 447 a.a., XRE family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 455 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  325 bits (834), Expect = 1e-93
 Identities = 187/427 (43%), Positives = 266/427 (62%), Gaps = 12/427 (2%)

Query: 14  HRRVWALAAPMILSNISVPLVALVDSMVIGHLPHAHQLGAVAVGASLYTFLAWAMGFLRM 73
           +R++ ALA PMILSNI+VPL+ LVD+ VIGHL  A+ LG VA+G+++ T + W +GFLRM
Sbjct: 18  NRQLLALALPMILSNITVPLLGLVDTAVIGHLSDAYYLGGVALGSTIITLIIWLLGFLRM 77

Query: 74  GSTGFAAQAAGRNDGAALRQILLQGLLLALGLAMLLGTVGIPLSHLALEWMQPSPELNQL 133
            +TG  AQA G ND  A  ++L+QG +LA GL + +  + IP+ +L+L   + S E+ + 
Sbjct: 78  ATTGLVAQAYGANDLNAQLKLLVQGAMLATGLGIAVILLQIPILNLSLSLSEASVEVERY 137

Query: 134 TQDFFHTRLFGLPAALASYALVGWFLGTQNARAPLAILLTTNLVNIALNLWFVLGLDWGV 193
            +++F  R++  P AL +  ++GW LG Q  +A +  L+  N+ NI L++ FV+G  W V
Sbjct: 138 CREYFQVRVWSTPFALLNLVMLGWLLGRQQPKAAMWQLIFANVANIILDVLFVIGFGWDV 197

Query: 194 VGSARASVVAEWTGALLGLAMTQKALRAYP----GHIAWAALKWWASWRPLLAVNRDIFI 249
            G+A ASV A+ T   + L M  + L+       GH+       +  +  LL +N DIFI
Sbjct: 198 KGAALASVCADITAFSVALYMVLQQLKLSSQFTFGHLRIHLT--FVGYGQLLRLNTDIFI 255

Query: 250 RSLALQSVFFMITVQGARLGDATVAANALLLNGLLLTAHALDGLAHAVEALCGHAIGAHD 309
           RSL LQ+ F  +T  GA LGD TVAANA+LLN LLL A+ALDG+A+  EA  G A G   
Sbjct: 256 RSLCLQAAFAFMTFHGAGLGDNTVAANAVLLNLLLLIAYALDGIAYYAEAEVGKAYGQKR 315

Query: 310 RQALRRSLVVAGGWSLIASVGFALLFTVAGHLFIAMQTDIPSVRETADIYLPYLAVLPLI 369
            Q LR ++++A  WS I+++GF+L+F + G   I + T+I  VR TA IYLP+L +LPL 
Sbjct: 316 TQPLREAVLLAWCWSAISALGFSLIFYLFGDRIIGLLTNIDEVRTTAQIYLPWLILLPLW 375

Query: 370 AVWSYLLDGLFIGATRAREMRNGMLL-TVVLVLPIAWALQGL-----GNHGLWITFLVFM 423
           +  SYL DG++IGA + + MRN M++ T     P  + LQ L      NH LW     FM
Sbjct: 376 SFSSYLFDGVYIGAAKGKVMRNSMIIATFGAFFPAWYLLQSLLPSEQANHALWAAMTAFM 435

Query: 424 TVRSLTL 430
             RSLTL
Sbjct: 436 LTRSLTL 442