Pairwise Alignments

Query, 375 a.a., cytochrome B559 subunit alpha from Pseudomonas simiae WCS417

Subject, 332 a.a., cytochrome c oxidase subunit II from Synechocystis sp000284455 PCC 6803

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 67/263 (25%), Positives = 108/263 (41%), Gaps = 31/263 (11%)

Query: 13  LWSVFGQAHAAWTTNMAPGATEVSHAVFDLHMTIFWICVVIGIIVFGAMFWSMILHRRST 72
           LW  +GQ H       +  A +V   +F+  MTI      + ++V G + + +I  RR  
Sbjct: 21  LW--YGQNHGLMPVAASADAEKVD-GIFNYMMTI---ATGLFLLVEGVLVYCLIRFRRRK 74

Query: 73  GQVA--AKFHESTTVEILWTVVPLLILIAMAIPATKTLINIYDSSESDIDIQVTGYQWKW 130
                      +  +EILWT +P +I+  +A+ + +   N+    +  I     G Q   
Sbjct: 75  DDQTDGPPIEGNVPLEILWTAIPTVIVFTLAVYSFEVYNNL-GGLDPTISRDNAGQQMAH 133

Query: 131 -HYKYLGQ-----------DVEFFSNLATPAEQIHNQAT--KGEHYLLEVDQP------- 169
            H  ++G            DV     L +  + ++      KG  Y      P       
Sbjct: 134 NHMGHMGSMGNMVAMAGDGDVALGIGLDSEEQGVNPLMVDVKGIQYAWIFTYPETGIISG 193

Query: 170 -LVLPVGAKVRFLVTAADVIHSWWVPAFAVKRDAIPGFVNEAWTRVEKPGIYRGQCAELC 228
            L  P+   V+  + A DVIH++W+P   +K+D IPG  +        PG Y   CAELC
Sbjct: 194 ELHAPIDRPVQLNMEAGDVIHAFWIPQLRLKQDVIPGRGSTLVFNASTPGQYPVICAELC 253

Query: 229 GKDHGFMPIVVEVKSKADYETWL 251
           G  HG M  V    +  +Y+ W+
Sbjct: 254 GAYHGGMKSVFYAHTPEEYDDWV 276