Pairwise Alignments

Query, 375 a.a., cytochrome B559 subunit alpha from Pseudomonas simiae WCS417

Subject, 314 a.a., alternative cytochrome C oxidase polypeptide II transmembrane protein from Sinorhizobium meliloti 1021

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 5/214 (2%)

Query: 47  FWICVVIGIIVFGAMFWSMILHRRSTGQVAAKFHESTTVEILWTVVPLLILIAMAIPATK 106
           FWI  +    V   M + ++  R   G  AA   E+  +E          + AM  P   
Sbjct: 43  FWITGIAFTAVVLFMAYCVLRFRHRPGNTAAYEPENRRLEGWLATGTTFGVAAMLAPGLF 102

Query: 107 TLINIYDSSESDIDIQVTGYQWKWHYKYLGQDVEFFSNLATPAEQ-----IHNQATKGEH 161
                    +   +++V G QW W ++  G D +  +             ++     G+ 
Sbjct: 103 VWNQFVTVPQDASEVEVIGQQWLWSFRLPGADGKLGTTETRDIAPENTLGVNRDDAAGQD 162

Query: 162 YLLEVDQPLVLPVGAKVRFLVTAADVIHSWWVPAFAVKRDAIPGFVNEAWTRVEKPGIYR 221
            ++     L LPVG  V+ L+ + DV+H ++VP F  K D +PG +   W    + G + 
Sbjct: 163 DIIIEGGELHLPVGKPVKMLLRSVDVLHDFYVPEFRAKMDMVPGMITYFWLTPTRTGTFE 222

Query: 222 GQCAELCGKDHGFMPIVVEVKSKADYETWLGERK 255
             CAELCG  H  M   V V ++ DY+ WL E++
Sbjct: 223 ILCAELCGVGHPQMRGTVVVDTEEDYQAWLAEQQ 256