Pairwise Alignments

Query, 355 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 322 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  350 bits (899), Expect = e-101
 Identities = 179/318 (56%), Positives = 234/318 (73%), Gaps = 7/318 (2%)

Query: 39  LGLYLLVTG-ALGWYWSEEPALFPVQQNAQLAAEKEGKQMVVGYTTVETLKTVVGTLLNK 97
           + L++++ G  +  +WS EP     Q+    A EK     VVGY T  +L   V TLL+K
Sbjct: 11  VALFIVLVGYVVSVWWSIEPDTLTPQELT--ATEKN----VVGYATTTSLILTVETLLDK 64

Query: 98  PGGYISNDRFPPGLWMDNMPSWEYGVLVQVRDLTRALRKDFARSQSQSAEDADLAKAEPR 157
            GG++SND  PP ++MDNMP++EYG L Q RDL   +RK+F+RSQSQS  D DL++A+ +
Sbjct: 65  QGGWLSNDVTPPSIFMDNMPAFEYGALEQARDLALIMRKEFSRSQSQSTADKDLSEAQAK 124

Query: 158 FNFDNKSWVLPSSESEYQEGINSLSRYEARLSDPNQRGALFYARADNLNNWLGDVATRLG 217
            N D+ SW++PS+ESEY++G+  L  Y AR+ DPN + A FYARADNLN WL +V  RLG
Sbjct: 125 LNIDHTSWLVPSAESEYRDGVKLLKLYRARMMDPNNQDAQFYARADNLNEWLKEVQKRLG 184

Query: 218 SLSQRLSASVGRVKLNTALKTEALAPGEVPQVDEEVVETPWMQIDNVFYEARGQAWALSH 277
           S+SQRLSASVG+ +LNT L  +  A    P +    V+T W +ID+VFYE+RG +WAL +
Sbjct: 185 SMSQRLSASVGQERLNTDLAGDNAARQSTPNLASHQVKTSWWKIDDVFYESRGASWALLN 244

Query: 278 LLRAIEVDFADVLAKKNATVSVRQIIRELEASQEPVWSPMILNGSGFGVLANHSLVMANY 337
            +RA+EVDFADVL KKNA VS+RQIIRELEA+Q+ VWSP++LNGSGFG++ANHSLVMANY
Sbjct: 245 FMRAVEVDFADVLKKKNAEVSLRQIIRELEATQQTVWSPVVLNGSGFGLVANHSLVMANY 304

Query: 338 ISRANAAVIDLRQLLNQG 355
           +SRANAAVIDL  LL+QG
Sbjct: 305 VSRANAAVIDLTNLLSQG 322