Pairwise Alignments

Query, 653 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  201 bits (511), Expect = 7e-56
 Identities = 134/350 (38%), Positives = 193/350 (55%), Gaps = 3/350 (0%)

Query: 307 MIGLIL--LIALLIDTLQRRLARVLTNLAPALSTWAEGDFSQPIALGKT-NRELHDIEAS 363
           +IGL++  ++A+L+  L R + R L +   A++  A G+      L  + N EL  +   
Sbjct: 195 LIGLLISAIMAVLVAILIRSIVRPLRHTMAAMANIASGEADLTRTLDVSGNDELTTLGRD 254

Query: 364 LNRLRAYLVDLVGTIRGNAEEVVGSSRALAELSSGLHDGAERQAGDTAQIRDSLGELEAT 423
            NR    L  +VG +   A  +  SSR+L++LS   H+ +++Q     Q+  ++ E+   
Sbjct: 255 FNRFTQKLRTVVGQLFETAGALDQSSRSLSQLSGQAHEQSQQQMLQMEQVATAINEVTYA 314

Query: 424 IQQVAGDASQAAGASRSAGQAVEQGQRVIGLSLTGLHALVGEVQQNAQMIEKLAEESATI 483
           +Q+VA +A  A+    SA     QGQR I  SL  +  L   + Q   +I+ LA+E+  I
Sbjct: 315 VQEVAKNAEHASSEVGSAENQAGQGQRNIETSLQQIDELSATIGQAVDVIQSLADETTKI 374

Query: 484 GGVLTVIRSIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAGATAEIQSLI 543
           G VL VI SIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LAQRT  +TAEI  +I
Sbjct: 375 GSVLEVIGSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQQSTAEIHGMI 434

Query: 544 AGLQSAAHQSVQGMRAQVEHAEATAQQAQAADGALDEIVGAIQTISETAVRIADVTAQQS 603
             LQ  +  +V  +      ++ T +QA  A  +L EI  A++ +S     IA  T QQS
Sbjct: 435 ERLQKNSGAAVNVIMESNRASQLTVEQASQAGESLGEIAQALRNLSGLNASIASATLQQS 494

Query: 604 GAVSEIRDNSERIHQMGEDNLLRIGQGRSQGEHLLVLGGQLNTAVQAFRV 653
             V +I  N  +   + +++ L   Q    G+ L  L GQLN  +  FRV
Sbjct: 495 HVVEDINQNVTQAAGLAQESTLAAEQSSEAGKQLGELAGQLNRLLSQFRV 544