Pairwise Alignments

Query, 653 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  203 bits (516), Expect = 2e-56
 Identities = 127/349 (36%), Positives = 197/349 (56%), Gaps = 1/349 (0%)

Query: 305 GVMIGLILLIALLIDTLQRRLARVLTNLAPALSTWAEGDFSQPIALGKTNRELHDIEASL 364
           G+++ L++   L    L R ++R L  L  A ++ A GD S+ IA  +   E+ +++ S+
Sbjct: 192 GLLLALLIGGGLFAMVLLRSISRPLEELKQAAASVAAGDLSRTIAC-RGKDEITEVQQSI 250

Query: 365 NRLRAYLVDLVGTIRGNAEEVVGSSRALAELSSGLHDGAERQAGDTAQIRDSLGELEATI 424
            +++  L D +  I+G+A ++  ++  L  ++     G  +Q  +      ++ E+ A +
Sbjct: 251 RQMQQTLRDTLQDIQGSATQLASAAEELHAVTQHTAQGIHQQNEEVQMAATAVTEMSAAV 310

Query: 425 QQVAGDASQAAGASRSAGQAVEQGQRVIGLSLTGLHALVGEVQQNAQMIEKLAEESATIG 484
            +VAG+A++ + ASR A    + G+R +  +   +  L  ++QQ A  + +LAEE+A+IG
Sbjct: 311 DEVAGNANRTSDASRDAETVADDGRRQVTATRQTIDQLSEKLQQTAGTVTRLAEEAASIG 370

Query: 485 GVLTVIRSIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAGATAEIQSLIA 544
            V+ VIR+IADQTNLLALNAAIEAARAGEAGRGFAVVADEVR+LAQRT  +T EI+ +I 
Sbjct: 371 QVVDVIRAIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQSSTQEIERMIG 430

Query: 545 GLQSAAHQSVQGMRAQVEHAEATAQQAQAADGALDEIVGAIQTISETAVRIADVTAQQSG 604
            +QSA  QSV+ M+   E A  +   A  AD AL  I   +  I+E  + IA    +Q+ 
Sbjct: 431 AIQSATEQSVRDMQQSSEFATRSQTMAGEADQALGLIAERVGQINEMNLVIASAAEEQAQ 490

Query: 605 AVSEIRDNSERIHQMGEDNLLRIGQGRSQGEHLLVLGGQLNTAVQAFRV 653
              E+  N   I  + E +     Q     + L  L   LN  V  FR+
Sbjct: 491 VAREVDRNLVAIRDISEQSATGAQQTSVASDELARLATHLNQLVGRFRL 539