Pairwise Alignments

Query, 653 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  184 bits (467), Expect = 7e-51
 Identities = 113/344 (32%), Positives = 186/344 (54%), Gaps = 1/344 (0%)

Query: 310 LILLIALLIDTLQRRLARVLTNLAPALSTWAEGDFSQPIALGKTNRELHDIEASLNRLRA 369
           LI++  +L+    R + R    L+  +   A+ + S+PI +   + E  D+   L + R 
Sbjct: 91  LIVVFVVLLLFAARVMLRQTQYLSDVIKLMAQRNLSEPIKMDCKD-EYGDVARELEKTRR 149

Query: 370 YLVDLVGTIRGNAEEVVGSSRALAELSSGLHDGAERQAGDTAQIRDSLGELEATIQQVAG 429
            L DL+      ++E+   +  +    S   D A+ +  +  Q+  ++ E+ +T+Q VA 
Sbjct: 150 QLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQTVAE 209

Query: 430 DASQAAGASRSAGQAVEQGQRVIGLSLTGLHALVGEVQQNAQMIEKLAEESATIGGVLTV 489
            A  A+  + +A Q  + GQ+ +  +++ +  L  ++  +AQ + ++ E    I  V+  
Sbjct: 210 HAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSVVGT 269

Query: 490 IRSIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAGATAEIQSLIAGLQSA 549
           IRSI++QTNLLALNAAIEAARAGEAGRGFAVVADEVR+LAQRT  AT EIQ +I+ LQS+
Sbjct: 270 IRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQLQSS 329

Query: 550 AHQSVQGMRAQVEHAEATAQQAQAADGALDEIVGAIQTISETAVRIADVTAQQSGAVSEI 609
           A+ +V  M   V  A    +    A   LD IV  +Q +++   +IA    QQS    E+
Sbjct: 330 ANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVAEEM 389

Query: 610 RDNSERIHQMGEDNLLRIGQGRSQGEHLLVLGGQLNTAVQAFRV 653
            +N   + ++ E ++  + +     E +     +L+  + AFRV
Sbjct: 390 NENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433