Pairwise Alignments

Query, 337 a.a., tRNA-dihydrouridine synthase B from Pseudomonas simiae WCS417

Subject, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

 Score =  100 bits (250), Expect = 4e-26
 Identities = 86/303 (28%), Positives = 149/303 (49%), Gaps = 22/303 (7%)

Query: 15  LILAPMAGVTDQPFRQLCKRLGAG-LVVSEMVTSDMSLWNTRKSRMRMIHEGDPEPRSVQ 73
           L +APM   TD+  R   + L A  L+ +EMVT+   +         + +  +  P ++Q
Sbjct: 7   LSVAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHGRGDF---LAYNQEEHPVALQ 63

Query: 74  IAGGDAQMLADAARANVELGAQIIDINMGCPAKKVCNKAAGSALLKDEQLVAEILQAVVA 133
             G + + LA  A+   E G   I++N+GCP+ +V N   G+ L+ +  LVAE + A+ A
Sbjct: 64  FGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAAMRA 123

Query: 134 AVDVPVTLKIRTGW-DRDNKNGLT--VAKIAEQAGITALAVHGR--------TRADLYTG 182
            VD+PVT+K R G  D+D+   LT  +A +AE+ G     +H R         + +    
Sbjct: 124 VVDIPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGLSPKENREIP 183

Query: 183 EAEYDTIAAIKQAV-SMPVFANGDIDSAEKARRVLHATGADGLLIGRAAQGRPWIFREIE 241
             +Y     IK+    + +  NG + S E+A+  LH    DG++IGR A   P++  E++
Sbjct: 184 PLDYPRAYQIKRDFPHLTIAVNGGVKSLEEAK--LHLQHLDGVMIGREAYQNPYLLAEVD 241

Query: 242 HFLRTGEVLPAPELVEVERILLEHLAALHAFYGDVMGVRIARKHVGWYLATLPGAREFRA 301
             +  G   P  +  +V   ++ ++       G  +G  + R  +G +   +PGAR++R 
Sbjct: 242 QQI-FGLETPVKKRSQVIHEMMPYIER-ELSQGTHLG-HMTRHMLGLF-QNMPGARQWRR 297

Query: 302 HFN 304
           H +
Sbjct: 298 HIS 300