Pairwise Alignments

Query, 337 a.a., tRNA-dihydrouridine synthase B from Pseudomonas simiae WCS417

Subject, 343 a.a., putative TIM-barrel protein, nifR3 family from Dechlorosoma suillum PS

 Score =  402 bits (1032), Expect = e-117
 Identities = 203/314 (64%), Positives = 245/314 (78%), Gaps = 1/314 (0%)

Query: 9   YTLQNGLILAPMAGVTDQPFRQLCKRLGAGLVVSEMVTSDMSLWNTRKSRMRMIHEGDPE 68
           +TL+N L +APMAGVTD+PFRQLCK LGAGL VSEMVTS+  L+ ++K++ R  HEG+  
Sbjct: 6   FTLRNNLFVAPMAGVTDRPFRQLCKTLGAGLAVSEMVTSNSLLYGSKKTQRRANHEGEVA 65

Query: 69  PRSVQIAGGDAQMLADAARANVELGAQIIDINMGCPAKKVCNKAAGSALLKDEQLVAEIL 128
           P SVQIAG D  M+A+AA+ NV+ GAQIIDINMGCPAKKVCN  AGSAL++DE LV  IL
Sbjct: 66  PISVQIAGADPAMMAEAAKYNVDNGAQIIDINMGCPAKKVCNVMAGSALMQDEVLVGRIL 125

Query: 129 QAVVAAV-DVPVTLKIRTGWDRDNKNGLTVAKIAEQAGITALAVHGRTRADLYTGEAEYD 187
           +AVV AV D PVTLK RTGW+R NKN  T+A+IAE +GI A+A+HGRTRAD YTGEAEY+
Sbjct: 126 EAVVGAVPDTPVTLKFRTGWNRLNKNAPTIARIAEASGIRAVAIHGRTRADQYTGEAEYE 185

Query: 188 TIAAIKQAVSMPVFANGDIDSAEKARRVLHATGADGLLIGRAAQGRPWIFREIEHFLRTG 247
           TIA +K  + +PV ANGDI + EKAR VL  TGADG++IGRAAQGRPWIFREIEHFL+TG
Sbjct: 186 TIALVKSQIGIPVIANGDITTPEKARHVLEVTGADGVMIGRAAQGRPWIFREIEHFLKTG 245

Query: 248 EVLPAPELVEVERILLEHLAALHAFYGDVMGVRIARKHVGWYLATLPGAREFRAHFNRLD 307
           E LP P + E+ RIL EHL  L+AFYG   GV+IARKH+ WY   L G+  FR   N+L 
Sbjct: 246 EHLPPPRVEEIHRILQEHLQDLYAFYGIETGVKIARKHISWYTKGLVGSAAFRKTMNQLM 305

Query: 308 DTEAQCANVREFFS 321
           + +AQ A V EFF+
Sbjct: 306 ELDAQQAAVNEFFA 319