Pairwise Alignments

Query, 923 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  277 bits (709), Expect = 3e-78
 Identities = 179/552 (32%), Positives = 301/552 (54%), Gaps = 24/552 (4%)

Query: 380  EARFSLSRDLAASNAEIAAKAEFLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQT 439
            E    L +   A++A   AK +FLA +SHEIRTPMN +LGM  L L TPL   QR YV  
Sbjct: 588  EMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTR 647

Query: 440  IHSAGNELLTLINEILDISKLESGQIELDDVQFDLNALIEDCLSIFRAKAEQQNVELISF 499
            I+ +   LL +IN+ILD SK+E+G++ ++ + F+L+ ++++  ++   KA+++ +E +  
Sbjct: 648  INESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMD 707

Query: 500  IQPQVPRVISGDPTRLRQAMLSLLENALQKTDEGEVLIVVALDD-RSTKPRLRIAVQDSG 558
            I P +P  + GDP RL Q M++L  NA++ T +GE+++   +      +  LR AV+D+G
Sbjct: 708  IDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFAVKDTG 767

Query: 559  LPMEAAERDALLHSELHSKNFFSATRLNGHLGLVIARQLILLMNGEFGIKSGSHQGSTLW 618
            + +   + D L  +   + N  +       LGL I++QL+ LM G+  + S   +GST  
Sbjct: 768  IGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFE 827

Query: 619  LTLPLDPERLEHPTSDLDGPLKG---ARVLVVDDNDTCRKVLVQQCSAWGLNVSAVPSGK 675
             ++    +  +    D+  P+ G    RVLVVDDND+ R +L    +A   NV  V +G 
Sbjct: 828  FSVVCGLQ--DAKMRDISQPVHGLADKRVLVVDDNDSARHILDSLLTAMRFNVVTVSNGF 885

Query: 676  EALALLRTKAHLRDYFDVVLLDQNMPGMTGMQLAAKIKEDPSLNHDILLIMLTGISNAPS 735
            EAL+ ++ K      FD++ +D NMPGM G++L  ++K    L   +   ++T      +
Sbjct: 886  EALSEIQQKP-----FDMLFVDWNMPGMNGIELLTRVK-TLGLRGHMKSFLVTAYGREIN 939

Query: 736  KIIARNCGIKRILAKPVAGYTLKTTLADELTQRSKGNVPPRPVLNTPAAITVP--TDFRI 793
                 +  +  ++ KPV    L   +       S G    R   N     + P      +
Sbjct: 940  LDGENSKLVDALIVKPVNPSNLLDAIV-----TSYGIEHVRHKTNEAHHNSRPNFAGQSL 994

Query: 794  LVAEDNSISTKVIRGMLGKLNLNPDTASNGEEALEAMKAQRYDLVLMDCEMPILDGFSAT 853
            L+ EDN ++ +V  G+L    LN   A++G+EALE ++   +DLVLMD +MP++DG +AT
Sbjct: 995  LLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITAT 1054

Query: 854  QQLRAWEVSHQRVRTPVVALTAHILSEHKERARQAGMDGHMAKPVELSQLRELVEFW--V 911
            + +RA    H     P+VA+TA+ ++   ER  QAGM+ H++KP+E+ +  +++  +  V
Sbjct: 1055 EHIRANPRWHS---LPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQV 1111

Query: 912  AQRQQRPEHAPS 923
            +  Q    H+P+
Sbjct: 1112 SDEQSFSSHSPN 1123