Pairwise Alignments

Query, 923 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1042 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  224 bits (570), Expect = 3e-62
 Identities = 187/582 (32%), Positives = 296/582 (50%), Gaps = 46/582 (7%)

Query: 359 FICLSGLLMSLALGERQRAIVEARFSLSR---DLAASNAEIAAKA--EFLAKISHEIRTP 413
           FIC+  L   + L ER+          S      A   AE+AAK   +FLA +SHEIRTP
Sbjct: 364 FICVEDLTR-MKLNERKIETYAQEMEFSNWALSEAREKAEVAAKTKEDFLACMSHEIRTP 422

Query: 414 MNGVLGMTELLLGTPLSVKQRDYVQTIHSAGNELLTLINEILDISKLESGQIELDDVQFD 473
           MNGV+G+  LL  T LS  Q+ YV    ++ + LL+L+N+ILD SK+ESG+ E++ ++FD
Sbjct: 423 MNGVIGILGLLGETQLSPMQKRYVDVASASADSLLSLLNDILDFSKIESGKFEIEAIEFD 482

Query: 474 LNALIEDCLSIFRAKAEQQNVELISFIQPQVPRVISGDPTRLRQAMLSLLENALQKTDEG 533
           L  L++  +     K E++++ L   I     R + GDP+RLRQ +++L+ NA++ T+EG
Sbjct: 483 LVELLDLFVQSVSLKLEERHLPLFVDITQLQYRYVVGDPSRLRQILVNLVGNAIKFTEEG 542

Query: 534 EVLIVVALDDR---STKPRLRIAVQDSGLPMEAAERDALLHSELHSKNFFSATRLNG--H 588
              I + L +R   S +  L   V+D+G+ + A E+ A+L +     +  S TR+ G   
Sbjct: 543 --WIALRLSNRLSESGEVLLSCEVEDTGIGI-AKEKLAMLFNPFIQVD-SSTTRMFGGTG 598

Query: 589 LGLVIARQLILLMNGEFGIKSGSHQGSTLWLTLP---LDPERLEHPTSDLDGPLKGARVL 645
           LGL IA++L  LM GE  ++S    GS    TL     D +++     D    L   RV 
Sbjct: 599 LGLSIAKRLCELMQGEIKVRSQQEVGSIFSFTLTQQLADSDKM----IDWRAGLSPERVT 654

Query: 646 VVDDNDTCRKVLVQQCSAWGLNVSAVPSGKEALALLRTKAHLRDYF---DVVLLDQNMPG 702
           ++       ++L +  ++WG  VS +   +E  A+L T   +  +    +  + + N   
Sbjct: 655 LMGQLGAFERMLGELLTSWGARVSYL---EEEDAILETDVIIYSFAPRREAFVEELN--- 708

Query: 703 MTGMQLAAKIKEDPSLNHDILLIMLTGISNAPSKIIARNCGIKRILAKPVAGYTLKTTLA 762
               +L  +  + P  N  +L ++         K  AR       L +P+    L   L+
Sbjct: 709 -AWRELVGQHADRP--NTRVLPLLSYWQQTEFEKQDAR----VPHLGRPLNIRQLIRALS 761

Query: 763 DELTQRSKGNVPPRPVLNTPAAITVPTDFRILVAEDNSISTKVIRGMLGKLNLNPDTASN 822
           D   +         PV+      ++P   ++L+ EDN ++  V  GML +L +  D ASN
Sbjct: 762 DRADEEM-----IEPVIEPIVEPSMPDKPKVLLVEDNKVNQMVALGMLHQLGVQADVASN 816

Query: 823 GEEA---LEAMKAQRYDLVLMDCEMPILDGFSATQQLRAWEVSHQRVRTPVVALTAHILS 879
           G EA   L A++   Y L+LMDC MP +DGF AT  +R  +   Q    P++ALTA+ + 
Sbjct: 817 GREALALLSALQGNPYQLILMDCLMPEMDGFQATAAIREGQGGSQFCALPIIALTANAMK 876

Query: 880 EHKERARQAGMDGHMAKPVELSQLRELVEFWVAQRQQRPEHA 921
             +E   +AGMD ++ KP+ LS L+E +  W +  QQ  E A
Sbjct: 877 GDREHCIRAGMDDYLTKPLVLSVLKECLYRWFSLSQQNYEAA 918



 Score = 44.3 bits (103), Expect = 4e-08
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 643 RVLVVDDNDTCRKVLVQQCSAWGLNVSAVPSGKEALALLRTKAHLRDYFDVVLLDQNMPG 702
           +VL+V+DN   + V +      G+      +G+EALALL   A   + + ++L+D  MP 
Sbjct: 786 KVLLVEDNKVNQMVALGMLHQLGVQADVASNGREALALL--SALQGNPYQLILMDCLMPE 843

Query: 703 MTGMQLAAKIKEDPSLNHDILLIMLTGISNAPSKIIARNC---GIKRILAKPVAGYTLKT 759
           M G Q  A I+E    +    L ++   +NA  K    +C   G+   L KP+    LK 
Sbjct: 844 MDGFQATAAIREGQGGSQFCALPIIALTANA-MKGDREHCIRAGMDDYLTKPLVLSVLKE 902

Query: 760 ------TLADELTQRSKGNVPPRPVLNTP 782
                 +L+ +  + + G+ P    L TP
Sbjct: 903 CLYRWFSLSQQNYEAALGHDPDVETLPTP 931