Pairwise Alignments

Query, 923 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1047 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  205 bits (522), Expect = 1e-56
 Identities = 139/426 (32%), Positives = 226/426 (53%), Gaps = 29/426 (6%)

Query: 381 ARFSLSRDLAASNAEIAAKAEFLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQTI 440
           A   L +   A+ +   AK EFLA +SHEIRTPMNG+LGMT+L L + L+ +QRDY++ +
Sbjct: 518 AELELQQAKEAAESANRAKGEFLANMSHEIRTPMNGILGMTDLALDSALTPEQRDYLEMV 577

Query: 441 HSAGNELLTLINEILDISKLESGQIELDDVQFDLNALIEDCLSIFRAKAEQQNVELISFI 500
            S+ + LL +IN+ILD SK+E+G++EL+ + F L  L+ + L     +A Q+++ L   +
Sbjct: 578 KSSADALLVIINDILDFSKIEAGKLELEHIHFHLRQLLRETLKPLELRARQRSLTLRCEV 637

Query: 501 QPQVPRVISGDPTRLRQAMLSLLENALQKTDEGEVLIVVALDDRSTKPRLRIAVQDSGLP 560
             +V     GDP RLRQ +++L+ NA++ T+EG+V + V   D      L  AV D+G+ 
Sbjct: 638 PEEVADGYLGDPGRLRQVLINLVGNAIKFTEEGQVAVRVEARD----GLLHFAVSDTGIG 693

Query: 561 MEAAERDALLHSELHSKNFFSATRLNG--HLGLVIARQLILLMNGEFGIKSGSHQGSTLW 618
           + A ++  +   E  S+   S TR  G   LGL I  +L+ LM G   ++S   QGST  
Sbjct: 694 IPADKQQLIF--EAFSQADSSVTRRFGGTGLGLTICTRLVRLMGGHMWVESDPGQGSTFH 751

Query: 619 LTLPLDPERLEHPTSDLDG-----PLKGARVLVVDDNDTCRKVLVQQCSAWGLNVSAVPS 673
            T  L+       + + D       L   R+LV +DN   +K+++      G  V+   +
Sbjct: 752 FTARLEAVAGPAESGEADAGRGEVVLPPLRLLVAEDNPVNQKLVLTLLQKRGHRVTLADN 811

Query: 674 GKEALALLRTKAHLRDYFDVVLLDQNMPGMTGMQLAAKIKEDPSLNHD---ILLIMLTGI 730
           G++ALA L T     D+FD+VL+D  MP M G++   +I+   +   D   + ++ +T  
Sbjct: 812 GQQALAALAT-----DHFDLVLMDMQMPVMGGLEATRRIRAAEAARGDGQHLPIVAMTAN 866

Query: 731 SNAPSKIIARNCGIKRILAKPVAGYTLKTTLADELTQRSKGNVPPRPVLNTPAAITVPTD 790
           + A  + +    G+   ++KP+      + +AD L        PP  +    AA  +P D
Sbjct: 867 AMAGDRELCLEAGMDGYVSKPLRRDEFFSAMADVL--------PPERLRQAGAAAAIPAD 918

Query: 791 FRILVA 796
            +  VA
Sbjct: 919 GQAAVA 924



 Score = 87.8 bits (216), Expect = 3e-21
 Identities = 43/108 (39%), Positives = 71/108 (65%), Gaps = 1/108 (0%)

Query: 792 RILVAEDNSISTKVIRGMLGKLNLNPDTASNGEEALEAMKAQRYDLVLMDCEMPILDGFS 851
           R+LVAEDN ++ K++  +L K       A NG++AL A+    +DLVLMD +MP++ G  
Sbjct: 781 RLLVAEDNPVNQKLVLTLLQKRGHRVTLADNGQQALAALATDHFDLVLMDMQMPVMGGLE 840

Query: 852 ATQQLRAWEVSH-QRVRTPVVALTAHILSEHKERARQAGMDGHMAKPV 898
           AT+++RA E +       P+VA+TA+ ++  +E   +AGMDG+++KP+
Sbjct: 841 ATRRIRAAEAARGDGQHLPIVAMTANAMAGDRELCLEAGMDGYVSKPL 888