Pairwise Alignments

Query, 923 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1223 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  183 bits (465), Expect = 5e-50
 Identities = 125/394 (31%), Positives = 205/394 (52%), Gaps = 20/394 (5%)

Query: 380  EARFSLSRDLAASNAEIAAKAEFLAKISHEIRTPMNGVLGMTELLL---GTPLSVKQRDY 436
            E +   SRD AA+ +E+  K++F+A ISHE+RTP++G+LG+ ++ L   G P  +  R+Y
Sbjct: 830  EEQMRASRDEAAAMSEL--KSQFVANISHEMRTPLSGILGIADVALTTEGNPALL--RNY 885

Query: 437  VQTIHSAGNELLTLINEILDISKLESGQIELDDVQFDLNALIEDCLSIFRAKAEQQNVEL 496
               + +    LL +IN++LD S+LE+G++ LD V++DL+  + D L+    +AE++ + L
Sbjct: 886  FSMVQNVAEGLLGVINDLLDFSRLEAGRMPLDKVEYDLHTTVRDALAPLAMQAERKGLAL 945

Query: 497  ISFIQPQVPRVISGDPTRLRQAMLSLLENALQKTDEGEVLIVVALDDRSTKPR--LRIAV 554
               +Q  +P  + GDP RLRQ +++L+ NA++ T +G V + V+  D  T  R  L   +
Sbjct: 946  ELHMQNGLPLTLRGDPLRLRQILVNLVGNAVKFTPQGTVHVDVSTGDGVTHDRECLVFTI 1005

Query: 555  QDSGLPMEAAERDALLHSELHSKNFFSATRLNGHLGLVIARQLILLMNGEFGIKSGSHQG 614
            +D+G  +   +   +  S   +   +S       LGL I+R L+ L  G+ G++S   +G
Sbjct: 1006 EDTGPGIPHEKLAHIFESFAQADGSYSRQHTGSGLGLAISRHLVELQGGDIGVQSTPGEG 1065

Query: 615  STLWLTLPL----DPERLEHPTSDLD--GPLKGARVLVVDDNDTCRKVLVQQCSAWGLNV 668
            S  W TLPL       R +    DLD   P    R+L+ +DN+  R+ L       G +V
Sbjct: 1066 SVFWFTLPLGDIHPARRTQRQRVDLDTRTPTTPLRILLAEDNELNREFLTIFLEEGGHSV 1125

Query: 669  SAVPSGKEALALLRTKAHLRDYFDVVLLDQNMPGMTGMQLAAKIKEDPSLNHDILLIMLT 728
                 G E L +L      R++ D+VL+D  MP M GM+    I+        + +I LT
Sbjct: 1126 VTACDGYEVLDILH-----REHVDLVLMDIQMPRMNGMEATRSIRSSGEAWSTVPVIALT 1180

Query: 729  GISNAPSKIIARNCGIKRILAKPVAGYTLKTTLA 762
              S A  +      G+   + KPV    L   +A
Sbjct: 1181 AHSMAGDRDRFIAEGMSDFVGKPVDRNELHAAIA 1214



 Score = 72.8 bits (177), Expect = 1e-16
 Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 10/126 (7%)

Query: 786  TVPTDFRILVAEDNSISTKVIRGMLGKLNLNPDTASNGEEALEAMKAQRYDLVLMDCEMP 845
            T  T  RIL+AEDN ++ + +   L +   +  TA +G E L+ +  +  DLVLMD +MP
Sbjct: 1094 TPTTPLRILLAEDNELNREFLTIFLEEGGHSVVTACDGYEVLDILHREHVDLVLMDIQMP 1153

Query: 846  ILDGFSATQQLR----AWEVSHQRVRTPVVALTAHILSEHKERARQAGMDGHMAKPVELS 901
             ++G  AT+ +R    AW         PV+ALTAH ++  ++R    GM   + KPV+ +
Sbjct: 1154 RMNGMEATRSIRSSGEAWST------VPVIALTAHSMAGDRDRFIAEGMSDFVGKPVDRN 1207

Query: 902  QLRELV 907
            +L   +
Sbjct: 1208 ELHAAI 1213